RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SUGP1Q8IWZ8 645 aaKnown RBP10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 ZNF557Q8N988 423 aaPredicted RBP10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 SYN2Q92777 582 aaPredicted RBP10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 IER2Q9BTL4 223 aa10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 SLC46A2Q9BY10 475 aa10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 OSBPL6Q9BZF3 934 aa10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 IRF2BPLQ9H1B7 796 aa10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 MFSD1Q9H3U5 465 aa10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 ZNF334Q9HCZ1 680 aaPredicted RBP10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 SIX2Q9NPC8 291 aa10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 ST7Q9NRC1 585 aa10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 ASNSD1Q9NWL6 643 aa10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 NAGPAQ9UK23 515 aa10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 NME7Q9Y5B8 376 aa10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 DOCK8Q8NF50 2099 aa10.79□□□□□ -0.68
TRAFD1-208ENST00000552890 REV3LO60673 3130 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 ANKRD62A6NC57 917 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 HHLA1C9JL84 531 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 CYP26A1O43174 497 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 OLFM2O95897 454 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 OAS1P00973 400 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 SLC2A3P11169 496 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 MBL2P11226 248 aaPredicted RBP10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 ATP1A3P13637 1013 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 CYP11B1P15538 503 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 BRD2P25440 801 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 GBP1P32455 592 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 GPD2P43304 727 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 IFNAR2P48551 515 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 RPL34P49207 117 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 GPR15P49685 360 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 CDR2Q01850 454 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 IFRD2Q12894 506 aaPredicted RBP10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 NNTQ13423 1086 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 TMEM31Q5JXX7 168 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 C10orf120Q5SQS8 335 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 SDHAF4Q5VUM1 108 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 TANGO2Q6ICL3 276 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 PARM1Q6UWI2 310 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 ZNF852Q6ZMS4 543 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 TMEM150AQ86TG1 271 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 TMEM110Q86TL2 294 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 TTC30AQ86WT1 665 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 UNC45BQ8IWX7 931 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 CPA6Q8N4T0 437 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 ZMIZ2Q8NF64 920 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 SCAMP5Q8TAC9 235 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 FGF14Q92915 247 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 SECISBP2LQ93073 1101 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 DDX50Q9BQ39 737 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 KCNH6Q9H252 994 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 GANQ9H2C0 597 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 HSD3B7Q9H2F3 369 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 ZNHIT6Q9NWK9 470 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 WDR35Q9P2L0 1181 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 CHORDC1Q9UHD1 332 aaPredicted RBP10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 SLC12A6Q9UHW9 1150 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 MUTYHQ9UIF7 546 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 LUC7L2Q9Y383 392 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 SH3BP1Q9Y3L3 701 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 HBS1LQ9Y450 684 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 FHOD1Q9Y613 1164 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 ITIH6Q6UXX5 1313 aa10.78□□□□□ -0.68
TRAFD1-208ENST00000552890 MYO10Q9HD67 2058 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 PRR33A8MZF0 331 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 RNF225M0QZC1 329 aaPredicted RBP10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 CAPN9O14815 690 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 GFPT2O94808 682 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 LATS1O95835 1130 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 ADH1CP00326 375 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 RARGP13631 454 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 GDI1P31150 447 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 CDH5P33151 784 aaPredicted RBP10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 CLCN1P35523 988 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 CHKAP35790 457 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 HARS2P49590 506 aaKnown RBP10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 JAM2P57087 298 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 YWHAGP61981 247 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 USP46P62068 366 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 CYP4F8P98187 520 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 ADIGQ0VDE8 80 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 ITPRIPL2Q3MIP1 535 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 SFMBT2Q5VUG0 894 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 APTXQ7Z2E3 356 aaKnown RBP10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 RALGPS2Q86X27 583 aaPredicted RBP10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 ERICH1Q86X53 443 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 DRC7Q8IY82 874 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 OSCP1Q8WVF1 389 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 TFAP2BQ92481 460 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 KAT5Q92993 513 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 ELMO3Q96BJ8 720 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 PLD4Q96BZ4 506 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 PPP1R13BQ96KQ4 1090 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 SLC4A5Q9BY07 1137 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 AIPL1Q9NZN9 384 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 GMIPQ9P107 970 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 CDH22Q9UJ99 828 aa10.77□□□□□ -0.69
TRAFD1-208ENST00000552890 GOLGA6L6A8MZA4 724 aa10.76□□□□□ -0.69
TRAFD1-208ENST00000552890 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms