RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 FAM102BQ5T8I3 360 aa4.91□□□□□ -1.62
CCDC38-206ENST00000548771 ZNF517Q6ZMY9 492 aaPredicted RBP4.91□□□□□ -1.62
CCDC38-206ENST00000548771 FAM177A1Q8N128 213 aaPredicted RBP4.91□□□□□ -1.62
CCDC38-206ENST00000548771 NRACQ8N912 160 aa4.91□□□□□ -1.62
CCDC38-206ENST00000548771 PRSS3P2Q8NHM4 247 aa4.91□□□□□ -1.62
CCDC38-206ENST00000548771 ZBTB45Q96K62 511 aaPredicted RBP4.91□□□□□ -1.62
CCDC38-206ENST00000548771 WACQ9BTA9 647 aa4.91□□□□□ -1.62
CCDC38-206ENST00000548771 DKK4Q9UBT3 224 aa4.91□□□□□ -1.62
CCDC38-206ENST00000548771 CAPN11Q9UMQ6 739 aa4.91□□□□□ -1.62
CCDC38-206ENST00000548771 H7C4K7 107 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 SOCS2O14508 198 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 DSCR3O14972 297 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 SRGAP2O75044 1071 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 CNOT3O75175 753 aaKnown RBP4.9□□□□□ -1.63
CCDC38-206ENST00000548771 U2AF1L5P0DN76 240 aaPredicted RBP4.9□□□□□ -1.63
CCDC38-206ENST00000548771 IL1R1P14778 569 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 HOXB6P17509 224 aaKnown RBP4.9□□□□□ -1.63
CCDC38-206ENST00000548771 MCM5P33992 734 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 RGS19P49795 217 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 U2AF1Q01081 240 aaKnown RBP eCLIP4.9□□□□□ -1.63
CCDC38-206ENST00000548771 FMO1Q01740 532 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 CFHR3Q02985 330 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 CFHR1Q03591 330 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 AWAT1Q58HT5 328 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 NXNQ6DKJ4 435 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 MRPL10Q7Z7H8 261 aaKnown RBP4.9□□□□□ -1.63
CCDC38-206ENST00000548771 SIGLEC11Q96RL6 698 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 C1orf112Q9NSG2 853 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 SACM1LQ9NTJ5 587 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 SEMA5BQ9P283 1151 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 MGAT4CQ9UBM8 478 aa4.9□□□□□ -1.63
CCDC38-206ENST00000548771 TLR2O60603 784 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 GCATO75600 419 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 PRF1P14222 555 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 CREB1P16220 341 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 PTDSS1P48651 473 aaKnown RBP4.89□□□□□ -1.63
CCDC38-206ENST00000548771 GATMP50440 423 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 CCT4P50991 539 aaKnown RBP4.89□□□□□ -1.63
CCDC38-206ENST00000548771 COPB1P53618 953 aaKnown RBP4.89□□□□□ -1.63
CCDC38-206ENST00000548771 LINC00205P59089 165 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 ARHGEF7Q14155 803 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 ZNF268Q14587 947 aaPredicted RBP4.89□□□□□ -1.63
CCDC38-206ENST00000548771 CNGA2Q16280 664 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 TRIM71Q2Q1W2 868 aaKnown RBP4.89□□□□□ -1.63
CCDC38-206ENST00000548771 MINDY4Q4G0A6 757 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 C3orf38Q5JPI3 329 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 UBE2Q1Q7Z7E8 422 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 TCEAL8Q8IYN2 117 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 NANOGP1Q8N7R0 232 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 OSR1Q8TAX0 266 aaPredicted RBP4.89□□□□□ -1.63
CCDC38-206ENST00000548771 EDC3Q96F86 508 aaKnown RBP4.89□□□□□ -1.63
CCDC38-206ENST00000548771 CHST8Q9H2A9 424 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 ASAP1Q9ULH1 1129 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 TPCN1Q9ULQ1 816 aa4.89□□□□□ -1.63
CCDC38-206ENST00000548771 CFAP69A5D8W1 941 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 A8MVJ9 347 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 EXOC5O00471 708 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 TMPRSS11DO60235 418 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 HRGP04196 525 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 PARP1P09874 1014 aaKnown RBP4.88□□□□□ -1.63
CCDC38-206ENST00000548771 TXNP10599 105 aaKnown RBP4.88□□□□□ -1.63
CCDC38-206ENST00000548771 MYF5P13349 255 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 HGFP14210 728 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 BTF3P20290 206 aaKnown RBP4.88□□□□□ -1.63
CCDC38-206ENST00000548771 GHRHRQ02643 423 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 DEUP1Q05D60 604 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 LRRC41Q15345 812 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 RBMS2Q15434 407 aaKnown RBP4.88□□□□□ -1.63
CCDC38-206ENST00000548771 TMTC4Q5T4D3 741 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 RANBP10Q6VN20 620 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 USP49Q70CQ1 688 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 CHST15Q7LFX5 561 aaPredicted RBP4.88□□□□□ -1.63
CCDC38-206ENST00000548771 METTL25Q8N6Q8 603 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 MAGEB6Q8N7X4 407 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 MAFAQ8NHW3 353 aaPredicted RBP4.88□□□□□ -1.63
CCDC38-206ENST00000548771 WIPF2Q8TF74 440 aaPredicted RBP4.88□□□□□ -1.63
CCDC38-206ENST00000548771 APIPQ96GX9 242 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 SNX15Q9NRS6 342 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 MTMR4Q9NYA4 1195 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 AFF4Q9UHB7 1163 aaKnown RBP4.88□□□□□ -1.63
CCDC38-206ENST00000548771 VPS51Q9UID3 782 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 RIMKLBQ9ULI2 386 aa4.88□□□□□ -1.63
CCDC38-206ENST00000548771 ADAM10O14672 748 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 RASAL1O95294 804 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 BRAFP15056 766 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 PGDP52209 483 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 RPS16P62249 146 aaKnown RBP4.87□□□□□ -1.63
CCDC38-206ENST00000548771 FHL1Q13642 323 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 FHL3Q13643 280 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 SLC29A2Q14542 456 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 ZNF260Q3ZCT1 412 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 LEXMQ3ZCV2 418 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 CACHD1Q5VU97 1274 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 DENND2CQ68D51 928 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 SHC4Q6S5L8 630 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 DCDC5Q6ZRR9 648 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 SESTD1Q86VW0 696 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 C12orf76Q8N812 135 aaPredicted RBP4.87□□□□□ -1.63
CCDC38-206ENST00000548771 MSLNLQ96KJ4 702 aa4.87□□□□□ -1.63
CCDC38-206ENST00000548771 SELENOOQ9BVL4 669 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms