RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 NPAS4Q8IUM7 802 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 COLGALT2Q8IYK4 626 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 ZNF570Q96NI8 536 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 RUNDC3BQ96NL0 473 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 TMEM110-MUSTN1A8MSY1 372 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 CYB561D2O14569 222 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 GJB6O95452 261 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 CYP1A1P04798 512 aaPredicted RBP17.24■□□□□ 0.35
BRF1-208ENST00000546997 CCDC15Q0P6D6 951 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 TIGD5Q53EQ6 642 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 C7orf61Q8IZ16 206 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 MCOLN2Q8IZK6 566 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 APPL2Q8NEU8 664 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 ZNF606Q8WXB4 792 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 SENP8Q96LD8 212 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 SELENOSQ9BQE4 189 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 KANSL3Q9P2N6 904 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 CTNNAL1Q9UBT7 734 aa17.24■□□□□ 0.35
BRF1-208ENST00000546997 MTRF1LQ9UGC7 380 aaKnown RBP17.24■□□□□ 0.35
BRF1-208ENST00000546997 VIMP08670 466 aaKnown RBP17.23■□□□□ 0.35
BRF1-208ENST00000546997 DEFB103AP81534 67 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 ATP11AP98196 1134 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 CNGA2Q16280 664 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 ASRGL1Q7L266 308 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 C16orf59Q7L2K0 433 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 PASD1Q8IV76 773 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 ADGRF2Q8IZF7 708 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 UBL4BQ8N7F7 174 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 CPA5Q8WXQ8 436 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 KRT35Q92764 455 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 CD101Q93033 1021 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 DDX27Q96GQ7 796 aaKnown RBP17.23■□□□□ 0.35
BRF1-208ENST00000546997 TMEM176AQ96HP8 235 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 BTBD6Q96KE9 485 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 UROC1Q96N76 676 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 FAM124BQ9H5Z6 455 aaPredicted RBP17.23■□□□□ 0.35
BRF1-208ENST00000546997 ECT2Q9H8V3 914 aa17.23■□□□□ 0.35
BRF1-208ENST00000546997 ABHD14A-ACY1A0A1B0GW23 586 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 AHCYL1O43865 530 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 HUS1O60921 280 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 UBOX5O94941 541 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 FESP07332 822 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 CD19P15391 556 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 LMO2P25791 158 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 ATP5DP30049 168 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 BRCC3P46736 316 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 PEX5P50542 639 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 RWDD2BP57060 319 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 CENPCQ03188 943 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 AP1ARQ63HQ0 302 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 WSCD1Q658N2 575 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 TOP6BLQ8N6T0 577 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 OR6B3Q8NGW1 331 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 BADQ92934 168 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 KLHL29Q96CT2 875 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 RAB3IPQ96QF0 476 aaPredicted RBP17.22■□□□□ 0.35
BRF1-208ENST00000546997 PRMT1Q99873 361 aaKnown RBP17.22■□□□□ 0.35
BRF1-208ENST00000546997 NT5C1AQ9BXI3 368 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 TRIM7Q9C029 511 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 DPH5Q9H2P9 285 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 DPEP3Q9H4B8 488 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 ARL2BPQ9Y2Y0 163 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 L3MBTL1Q9Y468 752 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 TIMM13Q9Y5L4 95 aaPredicted RBP17.22■□□□□ 0.35
BRF1-208ENST00000546997 LAMA3Q16787 3333 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 TBKBP1A7MCY6 615 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 HOXA2O43364 376 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 DIAPH2O60879 1101 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 ATP5HO75947 161 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 ATP2A2P16615 1042 aaKnown RBP17.22■□□□□ 0.35
BRF1-208ENST00000546997 WDR5P61964 334 aaKnown RBP17.22■□□□□ 0.35
BRF1-208ENST00000546997 ZNF211Q13398 564 aaPredicted RBP17.22■□□□□ 0.35
BRF1-208ENST00000546997 OTOP2Q7RTS6 562 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 ACOT1Q86TX2 421 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 OSTM1Q86WC4 334 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 C12orf29Q8N999 325 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 NRDE2Q9H7Z3 1164 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 IL23AQ9NPF7 189 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 AVENQ9NQS1 362 aaPredicted RBP17.22■□□□□ 0.35
BRF1-208ENST00000546997 PRKAG2Q9UGJ0 569 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 PRG3Q9Y2Y8 225 aaPredicted RBP17.22■□□□□ 0.35
BRF1-208ENST00000546997 NR2E1Q9Y466 385 aa17.22■□□□□ 0.35
BRF1-208ENST00000546997 SHBGP04278 402 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 MYBL1P10243 752 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 RARGP13631 454 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 CCNB1P14635 433 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 CHRNA3P32297 505 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 MSH2P43246 934 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 OR1G1P47890 313 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 MARCKSL1P49006 195 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 RBBP5Q15291 538 aaKnown RBP17.21■□□□□ 0.35
BRF1-208ENST00000546997 FAM133BQ5BKY9 247 aaKnown RBP17.21■□□□□ 0.35
BRF1-208ENST00000546997 DCLRE1AQ6PJP8 1040 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 TRIM72Q6ZMU5 477 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 TTC39CQ8N584 583 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 GRAMD1AQ96CP6 724 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 TRIM11Q96F44 468 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 HEXIM2Q96MH2 286 aaKnown RBP17.21■□□□□ 0.35
BRF1-208ENST00000546997 FAM193BQ96PV7 902 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms