RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 LHX1P48742 406 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 PSMC1P62191 440 aaKnown RBP13.22□□□□□ -0.29
ACTN1-206ENST00000544964 RPL10AP62906 217 aaKnown RBP13.22□□□□□ -0.29
ACTN1-206ENST00000544964 UBXN1Q04323 297 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 MTF1Q14872 753 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 EXOC3L4Q17RC7 722 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 FKBP15Q5T1M5 1219 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-206ENST00000544964 ARHGEF19Q8IW93 802 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 FAM160A2Q8N612 972 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-206ENST00000544964 EZH1Q92800 747 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-206ENST00000544964 MYLPFQ96A32 169 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 NAP1L5Q96NT1 182 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-206ENST00000544964 NT5C1BQ96P26 610 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 ARID3AQ99856 593 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 RTKNQ9BST9 563 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 NIF3L1Q9GZT8 377 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 CRTAC1Q9NQ79 661 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
ACTN1-206ENST00000544964 SEMA4GQ9NTN9 838 aa13.22□□□□□ -0.29
ACTN1-206ENST00000544964 POLR3BQ9NW08 1133 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-206ENST00000544964 GTPBP10A4D1E9 387 aaKnown RBP13.21□□□□□ -0.29
ACTN1-206ENST00000544964 C2orf78A6NCI8 922 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 RNF40O75150 1001 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 P4HA1P13674 534 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 CD58P19256 250 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 LMO2P25791 158 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 KLK7P49862 253 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 GRSF1Q12849 480 aaKnown RBP eCLIP13.21□□□□□ -0.29
ACTN1-206ENST00000544964 PDGFRLQ15198 375 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 CSRP2Q16527 193 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 FILIP1LQ4L180 1135 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 GJB7Q6PEY0 223 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 TRIM65Q6PJ69 517 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 PRR23CQ6ZRP0 262 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 RRAGAQ7L523 313 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 DPH6Q7L8W6 267 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 SPATA2LQ8IUW3 424 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-206ENST00000544964 OR6B3Q8NGW1 331 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 NETO1Q8TDF5 533 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 KAT5Q92993 513 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 SYT15Q9BQS2 421 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 LSM14BQ9BX40 385 aaKnown RBP13.21□□□□□ -0.29
ACTN1-206ENST00000544964 SNX25Q9H3E2 840 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 SIX2Q9NPC8 291 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 IFNKQ9P0W0 207 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 WNT6Q9Y6F9 365 aa13.21□□□□□ -0.29
ACTN1-206ENST00000544964 MYOFQ9NZM1 2061 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 TRAV19A0A0A6YYK7 116 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 A0A1B0GTH6 734 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 DCDC2BA2VCK2 349 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 SLC30A4O14863 429 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 GDF9O60383 454 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 TACC1O75410 805 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 CKMP06732 381 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 PDGFRBP09619 1106 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 WARSP23381 471 aaKnown RBP13.2□□□□□ -0.3
ACTN1-206ENST00000544964 GJA4P35212 333 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 PXNP49023 591 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-206ENST00000544964 UBASH3AP57075 661 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 USP46P62068 366 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 ZXDBP98169 803 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 CUL2Q13617 745 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 SYCP1Q15431 976 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 EML3Q32P44 896 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 CC2D1AQ6P1N0 951 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-206ENST00000544964 SCN4BQ8IWT1 228 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 PPM1KQ8N3J5 372 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 OSCP1Q8WVF1 389 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 GAB3Q8WWW8 586 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 PCMTD1Q96MG8 357 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-206ENST00000544964 CYP2S1Q96SQ9 504 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 ECT2Q9H8V3 914 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 TRPC7Q9HCX4 862 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 TMEM30AQ9NV96 361 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 AJAP1Q9UKB5 411 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-206ENST00000544964 CDH9Q9ULB4 789 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 NUP205Q92621 2012 aa13.2□□□□□ -0.3
ACTN1-206ENST00000544964 CCDC163A0A0D9SF12 145 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-206ENST00000544964 A8MXQ7 604 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 USP17L7P0C7H9 530 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 TCF3P15923 654 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 GNL1P36915 607 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-206ENST00000544964 GALK1P51570 392 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 NDST1P52848 882 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 ORC1Q13415 861 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 DPY19L2P1Q6NXN4 242 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 C4orf50Q6ZRC1 276 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 CEP68Q76N32 757 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 CPA6Q8N4T0 437 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 ARL14EPQ8N8R7 260 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-206ENST00000544964 PCED1BQ96HM7 432 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 SPATA17Q96L03 361 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 KREMEN1Q96MU8 473 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 P2RY13Q9BPV8 354 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 DPEP3Q9H4B8 488 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 CYP3A43Q9HB55 503 aa13.19□□□□□ -0.3
ACTN1-206ENST00000544964 UBE2TQ9NPD8 197 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms