RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ADRB1P08588 477 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 TRIM49P0CI25 452 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 TRIM49CP0CI26 452 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 HARSP12081 509 aaKnown RBP6.98□□□□□ -1.29
CDCA3-209ENST00000544610 MYL4P12829 197 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 GJA1P17302 382 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 CYLC1P35663 651 aaPredicted RBP6.98□□□□□ -1.29
CDCA3-209ENST00000544610 TNFSF9P41273 254 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 CXCL12P48061 93 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 AARSP49588 968 aaKnown RBP eCLIP6.98□□□□□ -1.29
CDCA3-209ENST00000544610 POLR2FP61218 127 aaKnown RBP6.98□□□□□ -1.29
CDCA3-209ENST00000544610 NOP14P78316 857 aaKnown RBP6.98□□□□□ -1.29
CDCA3-209ENST00000544610 SATB1Q01826 763 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 YWHAHQ04917 246 aaPredicted RBP6.98□□□□□ -1.29
CDCA3-209ENST00000544610 SPEM2Q0P670 501 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 PLD1Q13393 1074 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 TRPC3Q13507 836 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 SFMBT2Q5VUG0 894 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 LIMS2Q7Z4I7 341 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 ZSCAN30Q86W11 494 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 TMEM139Q8IV31 216 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 EFCAB13Q8IY85 973 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 FAM71AQ8IYT1 594 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 SPEM1Q8N4L4 309 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 C1orf127Q8N9H9 656 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 NETO1Q8TDF5 533 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 TAS1R2Q8TE23 839 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 RSPRY1Q96DX4 576 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 LSM14BQ9BX40 385 aaKnown RBP6.98□□□□□ -1.29
CDCA3-209ENST00000544610 LRRC3Q9BY71 257 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 NIF3L1Q9GZT8 377 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 XYLT2Q9H1B5 865 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 GDAP2Q9NXN4 497 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 RAB23Q9ULC3 237 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 INTUQ9ULD6 942 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 KIAA1257Q9ULG3 409 aa6.98□□□□□ -1.29
CDCA3-209ENST00000544610 TICRRQ7Z2Z1 1910 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 KMT2BQ9UMN6 2715 aaPredicted RBP6.97□□□□□ -1.29
CDCA3-209ENST00000544610 A0A1W2PRU2 124 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 DCDC2BA2VCK2 349 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 SLC38A8A6NNN8 435 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 EIF3CLB5ME19 914 aaKnown RBP6.97□□□□□ -1.29
CDCA3-209ENST00000544610 K7ESF4 209 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 PIRO00625 290 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 SLC30A4O14863 429 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 CHADO15335 359 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 TACC1O75410 805 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 IPO7O95373 1038 aaKnown RBP6.97□□□□□ -1.29
CDCA3-209ENST00000544610 VNN1O95497 513 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 PAEPP09466 180 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 SKILP12757 684 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 SLC9A1P19634 815 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 CNR2P34972 360 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 SOX5P35711 763 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 PIK3CAP42336 1068 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 KRT83P78385 493 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 CCZ1BP86790 482 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 CCZ1P86791 482 aaPredicted RBP6.97□□□□□ -1.29
CDCA3-209ENST00000544610 TFAMQ00059 246 aaKnown RBP6.97□□□□□ -1.29
CDCA3-209ENST00000544610 DMWDQ09019 674 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 INCA1Q0VD86 236 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 GPR17Q13304 367 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 BIRC3Q13489 604 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 LRRC32Q14392 662 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 STILQ15468 1287 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 CSRP2Q16527 193 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 LPAL2Q16609 132 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 ZNF699Q32M78 642 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 SEZ6Q53EL9 994 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 JADE1Q6IE81 842 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 WDR59Q6PJI9 974 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 PRR23BQ6ZRT6 265 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 RRAGAQ7L523 313 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 IRF2BP2Q7Z5L9 587 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 LONP2Q86WA8 852 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 UNC93AQ86WB7 457 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 RALGPS2Q86X27 583 aaPredicted RBP6.97□□□□□ -1.29
CDCA3-209ENST00000544610 TMEM86AQ8N2M4 240 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 TMEM130Q8N3G9 435 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 SPC24Q8NBT2 197 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 ZSWIM2Q8NEG5 633 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 OR5B17Q8NGF7 314 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 CSGALNACT1Q8TDX6 532 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 PGLYRP2Q96PD5 576 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 EIF3CQ99613 913 aaKnown RBP6.97□□□□□ -1.29
CDCA3-209ENST00000544610 CRACR2AQ9BSW2 395 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 MTMR12Q9C0I1 747 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 CRISPLD1Q9H336 500 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 SLITRK6Q9H5Y7 841 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 C8orf33Q9H7E9 229 aaPredicted RBP6.97□□□□□ -1.29
CDCA3-209ENST00000544610 SEMA4GQ9NTN9 838 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 RBM12Q9NTZ6 932 aaKnown RBP6.97□□□□□ -1.29
CDCA3-209ENST00000544610 DPP3Q9NY33 737 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 SIX4Q9UIU6 781 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 DNAJC12Q9UKB3 198 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 TIMM13Q9Y5L4 95 aaPredicted RBP6.97□□□□□ -1.29
CDCA3-209ENST00000544610 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.97□□□□□ -1.29
CDCA3-209ENST00000544610 CACNA1IQ9P0X4 2223 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 PTPRJQ12913 1337 aa6.97□□□□□ -1.29
CDCA3-209ENST00000544610 GPR179Q6PRD1 2367 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms