RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SNTNA6NMZ2 147 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 DNALI1O14645 258 aaPredicted RBP13.52□□□□□ -0.24
TNC-212ENST00000542877 TOMM70O94826 608 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 DLGAP3O95886 979 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 TBL3Q12788 808 aaKnown RBP13.52□□□□□ -0.24
TNC-212ENST00000542877 TP53BP2Q13625 1128 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 ABRAQ8N0Z2 381 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 KIAA0895Q8NCT3 520 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 PPP2R3CQ969Q6 453 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 PGM2Q96G03 612 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 SPASTQ9UBP0 616 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 AP4E1Q9UPM8 1137 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 SH3BP1Q9Y3L3 701 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 FAM205AQ6ZU69 1335 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 E9PBE3 544 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 F8W810 466 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 KLHL41O60662 606 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 MPOP05164 745 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 ARP10275 920 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 MPP3Q13368 585 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 ZNF484Q5JVG2 852 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 KYQ8NBH2 561 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 ACTL9Q8TC94 416 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 TLR10Q9BXR5 811 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 KCND1Q9NSA2 647 aa13.52□□□□□ -0.24
TNC-212ENST00000542877 C1orf167Q5SNV9 1468 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 MAGEB16A2A368 324 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 SUPT20HL2P0C7V6 817 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 GYS1P13807 737 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 CACNA2D1P54289 1103 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 ERVK-9P63128 1117 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 SEZ6Q53EL9 994 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 C4orf19Q8IY42 314 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 MCOLN2Q8IZK6 566 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 HS6ST3Q8IZP7 471 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 EIF1ADQ8N9N8 165 aaKnown RBP13.52□□□□□ -0.25
TNC-212ENST00000542877 KAZALD1Q96I82 304 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 SH3GL2Q99962 352 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 RIOX1Q9H6W3 641 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 SYTL2Q9HCH5 934 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 IQCA1LA6NCM1 817 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 AP1G2O75843 785 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 FBXO21O94952 628 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 ACOT1Q86TX2 421 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 SLC22A9Q8IVM8 553 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 GMCL1Q96IK5 515 aa13.52□□□□□ -0.25
TNC-212ENST00000542877 GJD4Q96KN9 370 aaPredicted RBP13.52□□□□□ -0.25
TNC-212ENST00000542877 PARK7Q99497 189 aaKnown RBP13.52□□□□□ -0.25
TNC-212ENST00000542877 FAM58BPP0C7Q3 252 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 GLRBP48167 497 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 RPL10AP62906 217 aaKnown RBP13.51□□□□□ -0.25
TNC-212ENST00000542877 YAF2Q8IY57 180 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 MAML3Q96JK9 1138 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 TMEM39BQ9GZU3 492 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 CISHQ9NSE2 258 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 LRCH1Q9Y2L9 728 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 NCAM2O15394 837 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 MAP3K6O95382 1288 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 TDRD10Q5VZ19 366 aaKnown RBP13.51□□□□□ -0.25
TNC-212ENST00000542877 DEFB107AQ8IZN7 70 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 VCPIP1Q96JH7 1222 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 GANQ9H2C0 597 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 PAPOLBQ9NRJ5 636 aaKnown RBP13.51□□□□□ -0.25
TNC-212ENST00000542877 KCNH4Q9UQ05 1017 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 CPS1P31327 1500 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 USP32Q8NFA0 1604 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 GUCA1CO95843 209 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 IRF1P10914 325 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 ACO1P21399 889 aaKnown RBP13.51□□□□□ -0.25
TNC-212ENST00000542877 MZF1P28698 734 aaPredicted RBP13.51□□□□□ -0.25
TNC-212ENST00000542877 RPL21P46778 160 aaKnown RBP13.51□□□□□ -0.25
TNC-212ENST00000542877 CCDC153Q494R4 210 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 ATP6AP1LQ52LC2 224 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 CEP78Q5JTW2 689 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 TAF2Q6P1X5 1199 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 SV2AQ7L0J3 742 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 ZCWPW1Q9H0M4 648 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 MMADHCQ9H3L0 296 aaPredicted RBP13.51□□□□□ -0.25
TNC-212ENST00000542877 PRDM5Q9NQX1 630 aaPredicted RBP13.51□□□□□ -0.25
TNC-212ENST00000542877 GPATCH2LQ9NWQ4 482 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 USE1Q9NZ43 259 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 STMN3Q9NZ72 180 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 PCDHA3Q9Y5H8 950 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 PRRG1O14668 218 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 MAP3K13O43283 966 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 SERPINE1P05121 402 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 MLNP12872 115 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 PRKAA2P54646 552 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 OTOAQ7RTW8 1153 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 GMCL1P1Q8NEA9 526 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 RSPH1Q8WYR4 309 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 GLMNQ92990 594 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 TMEM176AQ96HP8 235 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 POP1Q99575 1024 aaKnown RBP13.51□□□□□ -0.25
TNC-212ENST00000542877 TCF7L2Q9NQB0 619 aa13.51□□□□□ -0.25
TNC-212ENST00000542877 UBDO15205 165 aa13.5□□□□□ -0.25
TNC-212ENST00000542877 SLC11A2P49281 568 aa13.5□□□□□ -0.25
TNC-212ENST00000542877 MEA1Q16626 185 aa13.5□□□□□ -0.25
TNC-212ENST00000542877 CYP51A1Q16850 503 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms