RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 DRICH1Q6PGQ1 229 aaPredicted RBP18.02■□□□□ 0.48
TMEM50B-210ENST00000542230 LRIG3Q6UXM1 1119 aa18.02■□□□□ 0.48
TMEM50B-210ENST00000542230 SYDE1Q6ZW31 735 aaPredicted RBP18.02■□□□□ 0.48
TMEM50B-210ENST00000542230 ZC3H18Q86VM9 953 aaKnown RBP18.02■□□□□ 0.48
TMEM50B-210ENST00000542230 REM2Q8IYK8 340 aaPredicted RBP18.02■□□□□ 0.48
TMEM50B-210ENST00000542230 PYROXD2Q8N2H3 581 aa18.02■□□□□ 0.48
TMEM50B-210ENST00000542230 ERICH4A6NGS2 130 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 DDHD2O94830 711 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 ACSL3O95573 720 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 RAB27AP51159 221 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 MTM1Q13496 603 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 GPNMBQ14956 572 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 OTUD1Q5VV17 481 aaPredicted RBP18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 FAM35AQ86V20 835 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 LRRTM3Q86VH5 581 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 PQLC3Q8N755 202 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 NETO2Q8NC67 525 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 HSFY1Q96LI6 401 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 CDC42EP4Q9H3Q1 356 aaKnown RBP18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 PCDH18Q9HCL0 1135 aa18.02■□□□□ 0.47
TMEM50B-210ENST00000542230 C9IYK1 514 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 RIPK2O43353 540 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 AP1G2O75843 785 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 RPL9P32969 192 aaKnown RBP18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 MAP2K2P36507 400 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 KRT81Q14533 505 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 DCAF6Q58WW2 860 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 ZNF771Q7L3S4 317 aaPredicted RBP18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 FAM131BQ86XD5 332 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 CCDC89Q8N998 374 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 SLC43A3Q8NBI5 491 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 OR10T2Q8NGX3 314 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 PCDH19Q8TAB3 1148 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 ADAM32Q8TC27 787 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 ATP6V1G3Q96LB4 118 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 UNC93B1Q9H1C4 597 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 MFHAS1Q9Y4C4 1052 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 TRIM17Q9Y577 477 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 TTC3P53804 2025 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 FKTNO75072 461 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 CAND2O75155 1236 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 MYZAPP0CAP1 466 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 RARGP13631 454 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 SLCO1A2P46721 670 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 TKTL1P51854 596 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 KYNUQ16719 465 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 KRT71Q3SY84 523 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 SYCP2LQ5T4T6 812 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 ZDHHC17Q8IUH5 632 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 FAM71DQ8N9W8 422 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 SPATA18Q8TC71 538 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 CENPIQ92674 756 aaPredicted RBP18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 MTMR10Q9NXD2 777 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 PCDH10Q9P2E7 1040 aa18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 DRG1Q9Y295 367 aaKnown RBP18.01■□□□□ 0.47
TMEM50B-210ENST00000542230 YJEFN3A6XGL0 299 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 E7ENQ6 273 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 AMHP03971 560 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 FYNP06241 537 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 ITGAVP06756 1048 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 FAM200BP0CF97 657 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 GBP1P32455 592 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 HPDP32754 393 aaPredicted RBP18■□□□□ 0.47
TMEM50B-210ENST00000542230 LHX1P48742 406 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 MRPS5P82675 430 aaKnown RBP18■□□□□ 0.47
TMEM50B-210ENST00000542230 IFFO1Q0D2I5 559 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 MTFR1Q15390 333 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 HIBCHQ6NVY1 386 aaPredicted RBP18■□□□□ 0.47
TMEM50B-210ENST00000542230 RNF157Q96PX1 679 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 ULBP1Q9BZM6 244 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 RGS18Q9NS28 235 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 HCSTQ9UBK5 93 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 NAALADL1Q9UQQ1 740 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 EFR3BQ9Y2G0 817 aa18■□□□□ 0.47
TMEM50B-210ENST00000542230 TLDC2A0PJX2 215 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 GOLGA8MH3BSY2 632 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 APOC4-APOC2K7ER74 178 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 BANF1O75531 89 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 APOC2P02655 101 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 RPLP2P05387 115 aaKnown RBP17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 USP17L7P0C7H9 530 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 PTPN9P43378 593 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 EIF3EP60228 445 aaKnown RBP17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 DMTNQ08495 405 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 GRIK3Q13003 919 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 TUSC3Q13454 348 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 TCTN1Q2MV58 587 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 ANKRD20A8PQ5CZ79 823 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 DENND2CQ68D51 928 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 TMEM86AQ8N2M4 240 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 PLD5Q8N7P1 536 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 MYCBPAPQ8TBZ2 947 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 EPS8L3Q8TE67 593 aaKnown RBP17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 MYLPFQ96A32 169 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 RABEP2Q9H5N1 569 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 DHX35Q9H5Z1 703 aaKnown RBP17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 LRRC4Q9HBW1 653 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 DNAJB4Q9UDY4 337 aa17.99■□□□□ 0.47
TMEM50B-210ENST00000542230 HEY1Q9Y5J3 304 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms