RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 CERS3Q8IU89 383 aa9.53□□□□□ -0.88
MRPS35-204ENST00000542199 RPAP2Q8IXW5 612 aaPredicted RBP9.53□□□□□ -0.88
MRPS35-204ENST00000542199 MDGA1Q8NFP4 955 aa9.53□□□□□ -0.88
MRPS35-204ENST00000542199 OR52N2Q8NGI0 321 aa9.53□□□□□ -0.88
MRPS35-204ENST00000542199 WWC2-AS2Q96NR7 200 aa9.53□□□□□ -0.88
MRPS35-204ENST00000542199 BHMT2Q9H2M3 363 aa9.53□□□□□ -0.88
MRPS35-204ENST00000542199 ZMAT3Q9HA38 289 aaKnown RBP9.53□□□□□ -0.88
MRPS35-204ENST00000542199 DDX19BQ9UMR2 479 aa9.53□□□□□ -0.88
MRPS35-204ENST00000542199 ZSWIM8A7E2V4 1837 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 CAPN14A8MX76 684 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 IDH1O75874 414 aaKnown RBP9.52□□□□□ -0.89
MRPS35-204ENST00000542199 HMGCS2P54868 508 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 DYNLL1P63167 89 aaKnown RBP9.52□□□□□ -0.89
MRPS35-204ENST00000542199 PRKCZQ05513 592 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 DOCK1Q14185 1865 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 HLTFQ14527 1009 aaKnown RBP eCLIP9.52□□□□□ -0.89
MRPS35-204ENST00000542199 PABPC1LQ4VXU2 614 aaKnown RBP9.52□□□□□ -0.89
MRPS35-204ENST00000542199 PPP4R4Q6NUP7 873 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 FAM90A1Q86YD7 464 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 FOXP4Q8IVH2 680 aaPredicted RBP9.52□□□□□ -0.89
MRPS35-204ENST00000542199 RAET1EQ8TD07 263 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 SMCR8Q8TEV9 937 aaPredicted RBP9.52□□□□□ -0.89
MRPS35-204ENST00000542199 PGBD4Q96DM1 585 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 ATP6V0A4Q9HBG4 840 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 IL1RAPL2Q9NP60 686 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 PCDHGB6Q9Y5F9 930 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 MAST2Q6P0Q8 1798 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 RBBP6Q7Z6E9 1792 aaKnown RBP9.52□□□□□ -0.89
MRPS35-204ENST00000542199 PHIPQ8WWQ0 1821 aa9.52□□□□□ -0.89
MRPS35-204ENST00000542199 PTPRFP10586 1907 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 HMMRO75330 724 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 IPO13O94829 963 aaKnown RBP9.51□□□□□ -0.89
MRPS35-204ENST00000542199 AHSGP02765 367 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 MYL1P05976 194 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 ASNSP08243 561 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 COMTP21964 271 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 SLC6A2P23975 617 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 BACE1P56817 501 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 FAM110CQ1W6H9 321 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 KIAA0753Q2KHM9 967 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 SHROOM1Q2M3G4 852 aaPredicted RBP9.51□□□□□ -0.89
MRPS35-204ENST00000542199 SLC4A8Q2Y0W8 1093 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 COBLL1Q53SF7 1204 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 ATXN7L2Q5T6C5 722 aaPredicted RBP9.51□□□□□ -0.89
MRPS35-204ENST00000542199 MIGA1Q8NAN2 632 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 ATXN2LQ8WWM7 1075 aaKnown RBP9.51□□□□□ -0.89
MRPS35-204ENST00000542199 KIF1BPQ96EK5 621 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 FAM167AQ96KS9 214 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 RIOK1Q9BRS2 568 aaKnown RBP9.51□□□□□ -0.89
MRPS35-204ENST00000542199 WDCPQ9H6R7 721 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 SLAMF7Q9NQ25 335 aa9.51□□□□□ -0.89
MRPS35-204ENST00000542199 SIPA1L1O43166 1804 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 MFAP3LO75121 409 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 ZNF623O75123 536 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 HRGP04196 525 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 HLA-DOAP06340 250 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 ACO1P21399 889 aaKnown RBP9.5□□□□□ -0.89
MRPS35-204ENST00000542199 PURAQ00577 322 aaKnown RBP9.5□□□□□ -0.89
MRPS35-204ENST00000542199 TATDN1Q6P1N9 297 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 Q6ZRM9 215 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 MAEAQ7L5Y9 396 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 SGMS1Q86VZ5 419 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 SYT12Q8IV01 421 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 CLASRPQ8N2M8 674 aaKnown RBP9.5□□□□□ -0.89
MRPS35-204ENST00000542199 ANKRD13CQ8N6S4 541 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 OR10H5Q8NGA6 315 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 TTC17Q96AE7 1141 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 MIEF2Q96C03 454 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 MTFMTQ96DP5 389 aaKnown RBP9.5□□□□□ -0.89
MRPS35-204ENST00000542199 MRPL46Q9H2W6 279 aaKnown RBP9.5□□□□□ -0.89
MRPS35-204ENST00000542199 CHMP4BQ9H444 224 aaKnown RBP9.5□□□□□ -0.89
MRPS35-204ENST00000542199 AS3MTQ9HBK9 375 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 CD248Q9HCU0 757 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 ST6GALNAC2Q9UJ37 374 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 SLC45A2Q9UMX9 530 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 PCDHA6Q9UN73 950 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 GABRQQ9UN88 632 aa9.5□□□□□ -0.89
MRPS35-204ENST00000542199 CDHR4A6H8M9 788 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 TNPO2O14787 897 aaKnown RBP9.49□□□□□ -0.89
MRPS35-204ENST00000542199 POMCP01189 267 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 FTH1P19P0C7X4 201 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 MTHFD1P11586 935 aaKnown RBP9.49□□□□□ -0.89
MRPS35-204ENST00000542199 HOXA7P31268 230 aaPredicted RBP9.49□□□□□ -0.89
MRPS35-204ENST00000542199 GCLCP48506 637 aaPredicted RBP9.49□□□□□ -0.89
MRPS35-204ENST00000542199 RABGGTBP53611 331 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 FGL2Q14314 439 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 UBXN2BQ14CS0 331 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 C20orf194Q5TEA3 1177 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 APOA5Q6Q788 366 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 MAMDC4Q6UXC1 1216 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 ZFP28Q8NHY6 868 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 PACSIN1Q9BY11 444 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 KRTAP9-2Q9BYQ4 174 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 C22orf23Q9BZE7 217 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 CHST12Q9NRB3 414 aa9.49□□□□□ -0.89
MRPS35-204ENST00000542199 LOC285556D6RIA3 1793 aa9.48□□□□□ -0.89
MRPS35-204ENST00000542199 C19orf81C9J6K1 198 aa9.48□□□□□ -0.89
MRPS35-204ENST00000542199 MATN4O95460 622 aa9.48□□□□□ -0.89
MRPS35-204ENST00000542199 GH2P01242 217 aa9.48□□□□□ -0.89
MRPS35-204ENST00000542199 ITGB1P05556 798 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms