RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 KLHDC10Q6PID8 442 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 RHBDF2Q6PJF5 856 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 C12orf29Q8N999 325 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 FBXL13Q8NEE6 735 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 ZMIZ2Q8NF64 920 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 DDX1Q92499 740 aaKnown RBP12.04□□□□□ -0.48
VTN-203ENST00000542029 EZH1Q92800 747 aaPredicted RBP12.04□□□□□ -0.48
VTN-203ENST00000542029 CHAMP1Q96JM3 812 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 ZFRQ96KR1 1074 aaKnown RBP12.04□□□□□ -0.48
VTN-203ENST00000542029 GSDMAQ96QA5 445 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 CDK5RAP1Q96SZ6 601 aaKnown RBP12.04□□□□□ -0.48
VTN-203ENST00000542029 TSG101Q99816 390 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 GOLPH3LQ9H4A5 285 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 CYLDQ9NQC7 956 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 FAM49BQ9NUQ9 324 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 LSM7Q9UK45 103 aaKnown RBP12.04□□□□□ -0.48
VTN-203ENST00000542029 MMP17Q9ULZ9 603 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 SCML2Q9UQR0 700 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 TCHHQ07283 1943 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 K7EQS6 105 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 HOXC11O43248 304 aaPredicted RBP12.03□□□□□ -0.48
VTN-203ENST00000542029 KAT7O95251 611 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 ZNF806P0C7X5 589 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 TRIM49P0CI25 452 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 TRIM49CP0CI26 452 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 ADORA2BP29275 332 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 ATP5C1P36542 298 aaKnown RBP12.03□□□□□ -0.48
VTN-203ENST00000542029 TNFRSF4P43489 277 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 MXI1P50539 228 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 SLC8A3P57103 927 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 FKBP3Q00688 224 aaKnown RBP12.03□□□□□ -0.48
VTN-203ENST00000542029 CRY1Q16526 586 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 GAB4Q2WGN9 574 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 PLK5Q496M5 336 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 C2orf27AQ580R0 203 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 EOGTQ5NDL2 527 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 LY6G5CQ5SRR4 150 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 CLEC20AQ6ZU45 233 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 HTR3DQ70Z44 454 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 TRMT11Q7Z4G4 463 aaKnown RBP12.03□□□□□ -0.48
VTN-203ENST00000542029 KBTBD6Q86V97 674 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 ZNF276Q8N554 614 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 C12orf50Q8NA57 414 aaPredicted RBP12.03□□□□□ -0.48
VTN-203ENST00000542029 CNOT6LQ96LI5 555 aaKnown RBP12.03□□□□□ -0.48
VTN-203ENST00000542029 CCSER2Q9H7U1 834 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 APOBEC3GQ9HC16 384 aaKnown RBP12.03□□□□□ -0.48
VTN-203ENST00000542029 ARHGEF4Q9NR80 690 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 SPHK2Q9NRA0 654 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 RAB20Q9NX57 234 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 DEC1Q9P2X7 70 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 HMGXB4Q9UGU5 601 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.03□□□□□ -0.48
VTN-203ENST00000542029 DCHS1Q96JQ0 3298 aa12.03□□□□□ -0.48
VTN-203ENST00000542029 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.02□□□□□ -0.49
VTN-203ENST00000542029 TBC1D3BA6NDS4 549 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 SLC16A3O15427 465 aaKnown RBP12.02□□□□□ -0.49
VTN-203ENST00000542029 BEST1O76090 585 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 RALAP11233 206 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 CD58P19256 250 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 ACO1P21399 889 aaKnown RBP12.02□□□□□ -0.49
VTN-203ENST00000542029 PPP1R2P41236 205 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 PLA2G4AP47712 749 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 KIF11P52732 1056 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 LIMK1P53667 647 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 LRRC63Q05C16 580 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 ORC1Q13415 861 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 BYSLQ13895 437 aaKnown RBP12.02□□□□□ -0.49
VTN-203ENST00000542029 ZNF658Q5TYW1 1059 aaPredicted RBP12.02□□□□□ -0.49
VTN-203ENST00000542029 RASSF3Q86WH2 238 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 FMR1NBQ8N0W7 255 aaPredicted RBP12.02□□□□□ -0.49
VTN-203ENST00000542029 ELMO3Q96BJ8 720 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 TIGD1Q96MW7 591 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 TWNKQ96RR1 684 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 DUSP16Q9BY84 665 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 UBXN6Q9BZV1 441 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 ARRDC1-AS1Q9H2J1 176 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 MMRN2Q9H8L6 949 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 GDPD2Q9HCC8 539 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
VTN-203ENST00000542029 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.02□□□□□ -0.49
VTN-203ENST00000542029 VPS45Q9NRW7 570 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 CLIC5Q9NZA1 410 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 WDR35Q9P2L0 1181 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 DNMT3LQ9UJW3 386 aa12.02□□□□□ -0.49
VTN-203ENST00000542029 NCOR2Q9Y618 2525 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 SDK1Q7Z5N4 2213 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 MED19A0JLT2 244 aaPredicted RBP12.01□□□□□ -0.49
VTN-203ENST00000542029 HHLA1C9JL84 531 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 ZBTB24O43167 697 aaPredicted RBP12.01□□□□□ -0.49
VTN-203ENST00000542029 MPLP40238 635 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 PRCPP42785 496 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 SEC13P55735 322 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 YWHAEP62258 255 aaKnown RBP12.01□□□□□ -0.49
VTN-203ENST00000542029 STIM1Q13586 685 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 AASDHQ4L235 1098 aaPredicted RBP12.01□□□□□ -0.49
VTN-203ENST00000542029 IL31Q6EBC2 164 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 CCDC186Q7Z3E2 898 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 BBS7Q8IWZ6 715 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 ETFBKMTQ8IXQ9 262 aa12.01□□□□□ -0.49
VTN-203ENST00000542029 ELOA2Q8IYF1 753 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms