RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CLCN1P35523 988 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 GPD2P43304 727 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 RGS7P49802 495 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 TKTL1P51854 596 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 MFAP3P55082 362 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 USP4Q13107 963 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 RUNX3Q13761 415 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 MTF1Q14872 753 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 KLHL40Q2TBA0 621 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 EML3Q32P44 896 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 KLHDC7AQ5VTJ3 777 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 PM20D1Q6GTS8 502 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 ZNF852Q6ZMS4 543 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 ADGRG2Q8IZP9 1017 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 WDTC1Q8N5D0 677 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 PDZD8Q8NEN9 1154 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 OSCP1Q8WVF1 389 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 ZNF606Q8WXB4 792 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 SHC3Q92529 594 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 SECISBP2LQ93073 1101 aaKnown RBP10.25□□□□□ -0.77
YBX3-212ENST00000542002 SHDQ96IW2 340 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 KLF16Q9BXK1 252 aaPredicted RBP10.25□□□□□ -0.77
YBX3-212ENST00000542002 ULBP1Q9BZM6 244 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 KIF9Q9HAQ2 790 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 LTB4R2Q9NPC1 389 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 CYLDQ9NQC7 956 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.25□□□□□ -0.77
YBX3-212ENST00000542002 THG1LQ9NWX6 298 aaKnown RBP10.25□□□□□ -0.77
YBX3-212ENST00000542002 DUS2Q9NX74 493 aaKnown RBP10.25□□□□□ -0.77
YBX3-212ENST00000542002 CFAP97Q9P2B7 532 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 LIMA1Q9UHB6 759 aaKnown RBP10.25□□□□□ -0.77
YBX3-212ENST00000542002 CYTH4Q9UIA0 394 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 MYO15AQ9UKN7 3530 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 SYCE3A1L190 88 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 YJEFN3A6XGL0 299 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 E7ENQ6 273 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 SPECC1L-ADORA2AF8WAN1 911 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 EPHB6O15197 1021 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 TLR5O60602 858 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 LETM1O95202 739 aaPredicted RBP10.24□□□□□ -0.77
YBX3-212ENST00000542002 ZBED1O96006 694 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 CHRNB1P11230 501 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 RARGP13631 454 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 USP8P40818 1118 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 PLA2G4AP47712 749 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 RPL34P49207 117 aaKnown RBP10.24□□□□□ -0.77
YBX3-212ENST00000542002 TUBP50607 506 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 KPNA1P52294 538 aaPredicted RBP10.24□□□□□ -0.77
YBX3-212ENST00000542002 COPB1P53618 953 aaKnown RBP10.24□□□□□ -0.77
YBX3-212ENST00000542002 BCAT1P54687 386 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 MLLT6P55198 1093 aaPredicted RBP10.24□□□□□ -0.77
YBX3-212ENST00000542002 PLCB2Q00722 1185 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 MYL5Q02045 173 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 BST2Q10589 180 aaKnown RBP10.24□□□□□ -0.77
YBX3-212ENST00000542002 UBXN2BQ14CS0 331 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 GAB4Q2WGN9 574 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 ITPRIPL2Q3MIP1 535 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 ENOSF1Q7L5Y1 443 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 FAM71AQ8IYT1 594 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 MAML2Q8IZL2 1156 aaPredicted RBP10.24□□□□□ -0.77
YBX3-212ENST00000542002 AOPEPQ8N6M6 819 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 DTWD2Q8NBA8 298 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 CSGALNACT1Q8TDX6 532 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 CLEC4CQ8WTT0 213 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 KCTD13Q8WZ19 329 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 FAM3CQ92520 227 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 CLDN23Q96B33 292 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 P2RY11Q96G91 374 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 DNAI2Q9GZS0 605 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 ECT2Q9H8V3 914 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 TLR8Q9NR97 1041 aaKnown RBP10.24□□□□□ -0.77
YBX3-212ENST00000542002 HESX1Q9UBX0 185 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 NAGPAQ9UK23 515 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 NDRG2Q9UN36 371 aaKnown RBP10.24□□□□□ -0.77
YBX3-212ENST00000542002 FHOD1Q9Y613 1164 aa10.24□□□□□ -0.77
YBX3-212ENST00000542002 ANTXRLA6NF34 631 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 M0QYV0 167 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 PES1O00541 588 aaKnown RBP10.23□□□□□ -0.77
YBX3-212ENST00000542002 GALR2O43603 387 aaPredicted RBP10.23□□□□□ -0.77
YBX3-212ENST00000542002 KLKB1P03952 638 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 LCP1P13796 627 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 HOXC13P31276 330 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 CTHP32929 405 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 GJA4P35212 333 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 ATP5C1P36542 298 aaKnown RBP10.23□□□□□ -0.77
YBX3-212ENST00000542002 PDE6CP51160 858 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 GALK1P51570 392 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 ADIGQ0VDE8 80 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 GAS6Q14393 721 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 DRAP1Q14919 205 aaPredicted RBP10.23□□□□□ -0.77
YBX3-212ENST00000542002 IQCB1Q15051 598 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 PON2Q15165 354 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 PDGFRLQ15198 375 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 CC2D1AQ6P1N0 951 aaPredicted RBP10.23□□□□□ -0.77
YBX3-212ENST00000542002 RHBDF2Q6PJF5 856 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 SLC47A2Q86VL8 602 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 RALGPS2Q86X27 583 aaPredicted RBP10.23□□□□□ -0.77
YBX3-212ENST00000542002 SCUBE3Q8IX30 993 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 ZNF276Q8N554 614 aa10.23□□□□□ -0.77
YBX3-212ENST00000542002 BPIFA3Q9BQP9 254 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms