RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 NKX1-2Q9UD57 310 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-203ENST00000540357 NOCTQ9UK39 431 aaKnown RBP13.47□□□□□ -0.25
DNMT1-203ENST00000540357 AFG3L2Q9Y4W6 797 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 F8VP50 259 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 TCN1P20061 433 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-203ENST00000540357 EIF4BP23588 611 aaKnown RBP13.47□□□□□ -0.25
DNMT1-203ENST00000540357 MRPS9P82933 396 aaKnown RBP13.47□□□□□ -0.25
DNMT1-203ENST00000540357 PPIDQ08752 370 aaKnown RBP13.47□□□□□ -0.25
DNMT1-203ENST00000540357 GRIK3Q13003 919 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 ACAP1Q15027 740 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 TTC33Q6PID6 262 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-203ENST00000540357 DCLK2Q8N568 766 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 PCYOX1LQ8NBM8 494 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 PIWIL2Q8TC59 973 aaKnown RBP13.47□□□□□ -0.25
DNMT1-203ENST00000540357 TAAR1Q96RJ0 339 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 CNPY3Q9BT09 278 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 SLC17A7Q9P2U7 560 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 BAG5Q9UL15 447 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 TOMM70O94826 608 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 STMN1P16949 149 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 ALDH1A3P47895 512 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 PCYT1AP49585 367 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 CDK7P50613 346 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 WDR4P57081 412 aaKnown RBP13.47□□□□□ -0.25
DNMT1-203ENST00000540357 NAB1Q13506 487 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 TCEAL1Q15170 157 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 ANKS1BQ7Z6G8 1248 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 TXLNGYQ9BZA5 131 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 ACAD9Q9H845 621 aa13.47□□□□□ -0.25
DNMT1-203ENST00000540357 DDTLA6NHG4 134 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 RAD17O75943 681 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 SEC24DO94855 1032 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 RPL22P35268 128 aaKnown RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 PDK1Q15118 436 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 SMAD1Q15797 465 aaKnown RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 SEL1L3Q68CR1 1132 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 POLNQ7Z5Q5 900 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 ALYREFQ86V81 257 aaKnown RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 TFB1MQ8WVM0 346 aaKnown RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 DLG3Q92796 817 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 DGCR14Q96DF8 476 aaKnown RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 FAXDC2Q96IV6 333 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 MBOAT7Q96N66 472 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 DDX18Q9NVP1 670 aaKnown RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 APPL1Q9UKG1 709 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 NUP188Q5SRE5 1749 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 SPDYE5A6NIY4 337 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 KDELR1P24390 212 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 ATXN3P54252 364 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 NOMO3P69849 1222 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 BAATQ14032 418 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 SLC35G1Q2M3R5 365 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 POU5F2Q8N7G0 328 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 RNF149Q8NC42 400 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 ZFAND2BQ8WV99 257 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 FAM151AQ8WW52 585 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 NUB1Q9Y5A7 615 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 LRP6O75581 1613 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 CLUHO75153 1309 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 E9PBE3 544 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 PSMD3O43242 534 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 KLHL41O60662 606 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 SUPT3HO75486 399 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 POU5F1Q01860 360 aaKnown RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 USP10Q14694 798 aaKnown RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 EZH1Q92800 747 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-203ENST00000540357 GID8Q9NWU2 228 aa13.46□□□□□ -0.25
DNMT1-203ENST00000540357 LAMB4A4D0S4 1761 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 ATP9BO43861 1147 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 CHRNB2P17787 502 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 POU5F1BQ06416 359 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 PDAP1Q13442 181 aaKnown RBP13.46□□□□□ -0.26
DNMT1-203ENST00000540357 LPCAT2Q7L5N7 544 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 FAM228AQ86W67 206 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 CHSY1Q86X52 802 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 TDRD5Q8NAT2 981 aaKnown RBP13.46□□□□□ -0.26
DNMT1-203ENST00000540357 RIN3Q8TB24 985 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 C7orf26Q96N11 449 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 ZMAT2Q96NC0 199 aaKnown RBP13.46□□□□□ -0.26
DNMT1-203ENST00000540357 TCF7L2Q9NQB0 619 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 GJA3Q9Y6H8 435 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 MYH6P13533 1939 aa13.46□□□□□ -0.26
DNMT1-203ENST00000540357 SLC25A3Q00325 362 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 HACE1Q8IYU2 909 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 GCNAQ96QF7 691 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 SPC25Q9HBM1 224 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 S100A14Q9HCY8 104 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 C6orf203Q9P0P8 240 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-203ENST00000540357 PMLP29590 882 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 STAT5BP51692 787 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 RPS6P62753 249 aaKnown RBP13.45□□□□□ -0.26
DNMT1-203ENST00000540357 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 FAM182BQ5T319 152 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 IKZF4Q9H2S9 585 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 C16orf96A6NNT2 1141 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 BANF1O75531 89 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 OATP04181 439 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 VAV1P15498 845 aa13.45□□□□□ -0.26
DNMT1-203ENST00000540357 DRICH1Q6PGQ1 229 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms