RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 SCAIQ8N9R8 606 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 ICA1LQ8NDH6 482 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 PPP1R14CQ8TAE6 165 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 RASGRP4Q8TDF6 673 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 SDR42E1Q8WUS8 393 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 EFHD2Q96C19 240 aaPredicted RBP6.99□□□□□ -1.29
USP28-207ENST00000538475 MTBPQ96DY7 904 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 FAM161BQ96MY7 647 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 MBOAT7Q96N66 472 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 CORO1BQ9BR76 489 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 DHRS4Q9BTZ2 278 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 UNKQ9C0B0 810 aaKnown RBP6.99□□□□□ -1.29
USP28-207ENST00000538475 ZCWPW1Q9H0M4 648 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 THAP2Q9H0W7 228 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 CCDC68Q9H2F9 335 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 RIOX1Q9H6W3 641 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 AKTIPQ9H8T0 292 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 RMI1Q9H9A7 625 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 USP29Q9HBJ7 922 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 DCP1AQ9NPI6 582 aaPredicted RBP6.99□□□□□ -1.29
USP28-207ENST00000538475 ETNK2Q9NVF9 386 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 MKS1Q9NXB0 559 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 GIN1Q9NXP7 522 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 UTP6Q9NYH9 597 aaKnown RBP6.99□□□□□ -1.29
USP28-207ENST00000538475 PCDHA12Q9UN75 941 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 SOX13Q9UN79 622 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 PLA2G4CQ9UP65 541 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 COG5Q9UP83 839 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 HBS1LQ9Y450 684 aaKnown RBP6.99□□□□□ -1.29
USP28-207ENST00000538475 SBF2Q86WG5 1849 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 SPATA31A5Q5VU36 1347 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 SPATA31A7Q8IWB4 1347 aa6.99□□□□□ -1.29
USP28-207ENST00000538475 TANC1Q9C0D5 1861 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 DYTNA2CJ06 578 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 FCHO1O14526 889 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 DNALI1O14645 258 aaPredicted RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 PLSCR1O15162 318 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 PSTPIP1O43586 416 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 CYTH3O43739 400 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ZNF189O75820 626 aaPredicted RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 PDE5AO76074 875 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 FTLP02792 175 aaPredicted RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 CAPNS1P04632 268 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 SERPINA6P08185 405 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 CD48P09326 243 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 DLDP09622 509 aaKnown RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 ACTN1P12814 892 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 AOC1P19801 751 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 EPHA1P21709 976 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 NOS3P29474 1203 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 STIP1P31948 543 aaKnown RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 TTKP33981 857 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 CD68P34810 354 aaPredicted RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 RPA3P35244 121 aaPredicted RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 CHKAP35790 457 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 CCNFP41002 786 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 CDK9P50750 372 aaKnown RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 NEK3P51956 506 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 SLC12A3P55017 1021 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 GSTM4Q03013 218 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 BTKQ06187 659 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 PPIDQ08752 370 aaKnown RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 ALCAMQ13740 583 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 APOFQ13790 326 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 LPIN1Q14693 890 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 NDUFA5Q16718 116 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ZC2HC1CQ53FD0 456 aaPredicted RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 PARP10Q53GL7 1025 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ASPRV1Q53RT3 343 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 CAVIN4Q5BKX8 364 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 EFHC1Q5JVL4 640 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 OGFRL1Q5TC84 451 aaPredicted RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 C12orf60Q5U649 245 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 C1orf146Q5VVC0 180 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 KRT39Q6A163 491 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 KLHDC10Q6PID8 442 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 RINLQ6ZS11 566 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ULK2Q8IYT8 1036 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ZNF34Q8IZ26 560 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 RTKN2Q8IZC4 609 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ZDHHC14Q8IZN3 488 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ZNF276Q8N554 614 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 MIGA1Q8NAN2 632 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ADCY4Q8NFM4 1077 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 UHMK1Q8TAS1 419 aaKnown RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 PYROXD1Q8WU10 500 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 DHX38Q92620 1227 aaKnown RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 ARHGEF26Q96DR7 871 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 COX4I2Q96KJ9 171 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 RBM15Q96T37 977 aaKnown RBP eCLIP6.98□□□□□ -1.29
USP28-207ENST00000538475 TMEM120AQ9BXJ8 343 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ADAM19Q9H013 955 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 DHX33Q9H6R0 707 aaKnown RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 NPHS2Q9NP85 383 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 SLCO1B3Q9NPD5 702 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 VPS45Q9NRW7 570 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 DMAC2Q9NW81 257 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 TMOD4Q9NZQ9 345 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 KCND2Q9NZV8 630 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ABCF2Q9UG63 623 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms