RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 PTPN1P18031 435 aaKnown RBP8.54□□□□□ -1.04
CHFR-211ENST00000535897 TNNI1P19237 187 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 NTSR1P30989 418 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 STAT6P42226 847 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 SCAPQ12770 1279 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 HNRNPDQ14103 355 aaKnown RBP8.54□□□□□ -1.04
CHFR-211ENST00000535897 TRIP6Q15654 476 aaKnown RBP8.54□□□□□ -1.04
CHFR-211ENST00000535897 HECTD3Q5T447 861 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 SYCP2LQ5T4T6 812 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 GRAMD4Q6IC98 578 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 STXBP4Q6ZWJ1 553 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 RAB44Q7Z6P3 723 aaPredicted RBP8.54□□□□□ -1.04
CHFR-211ENST00000535897 WDR49Q8IV35 697 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 NAXDQ8IW45 347 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 BBS7Q8IWZ6 715 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 NUP93Q8N1F7 819 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 PHTF2Q8N3S3 785 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 PNPLA1Q8N8W4 532 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 TERB1Q8NA31 727 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 KCNV2Q8TDN2 545 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 SCFD1Q8WVM8 642 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 DNAJC19Q96DA6 116 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 OTUB2Q96DC9 234 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 CAMK1GQ96NX5 476 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 MED10Q9BTT4 135 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 FGFBP2Q9BYJ0 223 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 PANK2Q9BZ23 570 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 DPEP3Q9H4B8 488 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 CCSER2Q9H7U1 834 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 CAPN10Q9HC96 672 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 DNAJC17Q9NVM6 304 aaKnown RBP8.54□□□□□ -1.04
CHFR-211ENST00000535897 NXF1Q9UBU9 619 aaKnown RBP8.54□□□□□ -1.04
CHFR-211ENST00000535897 SUSD2Q9UGT4 822 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 CHORDC1Q9UHD1 332 aaPredicted RBP8.54□□□□□ -1.04
CHFR-211ENST00000535897 ATP8B3O60423 1300 aa8.54□□□□□ -1.04
CHFR-211ENST00000535897 MYO18AQ92614 2054 aaKnown RBP8.53□□□□□ -1.04
CHFR-211ENST00000535897 PCDH15Q96QU1 1955 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 ADAMTS20P59510 1910 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 IGHV1OR15-9A0A0B4J2B8 117 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 A0A1W2PQD8 194 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 MEI4A8MW99 385 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 NEDD8-MDP1E9PL57 170 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 TAF4O00268 1085 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 CLDN5O00501 218 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 TRIM24O15164 1050 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 HOXC11O43248 304 aaPredicted RBP8.53□□□□□ -1.04
CHFR-211ENST00000535897 SH3BP5O60239 455 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 FTH1P19P0C7X4 201 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 CHRM1P11229 460 aaPredicted RBP8.53□□□□□ -1.04
CHFR-211ENST00000535897 CD59P13987 128 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 NDUFV2P19404 249 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 CEBPZQ03701 1054 aaKnown RBP8.53□□□□□ -1.04
CHFR-211ENST00000535897 TRPC3Q13507 836 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 COL28A1Q2UY09 1125 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 WDR72Q3MJ13 1102 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 WDR45BQ5MNZ6 344 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 EGFLAMQ63HQ2 1017 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 KIAA1324Q6UXG2 1013 aaKnown RBP8.53□□□□□ -1.04
CHFR-211ENST00000535897 CCDC73Q6ZRK6 1079 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 TRAPPC11Q7Z392 1133 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 LIMS2Q7Z4I7 341 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 PDZD3Q86UT5 571 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 TMEM25Q86YD3 366 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 SLC41A1Q8IVJ1 513 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 ETFBKMTQ8IXQ9 262 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 CCDC65Q8IXS2 484 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 RDH13Q8NBN7 331 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 SETD7Q8WTS6 366 aaKnown RBP8.53□□□□□ -1.04
CHFR-211ENST00000535897 CCDC127Q96BQ5 260 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 CLIC6Q96NY7 704 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 XPO6Q96QU8 1125 aaKnown RBP8.53□□□□□ -1.04
CHFR-211ENST00000535897 BBS2Q9BXC9 721 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 B3GNT5Q9BYG0 378 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 FAM124BQ9H5Z6 455 aaPredicted RBP8.53□□□□□ -1.04
CHFR-211ENST00000535897 CCDC86Q9H6F5 360 aaKnown RBP8.53□□□□□ -1.04
CHFR-211ENST00000535897 KIAA1586Q9HCI6 787 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 SPHK2Q9NRA0 654 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 TMEM30AQ9NV96 361 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 DNAAF2Q9NVR5 837 aaKnown RBP8.53□□□□□ -1.04
CHFR-211ENST00000535897 HSPBP1Q9NZL4 362 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.53□□□□□ -1.04
CHFR-211ENST00000535897 CLIC4Q9Y696 253 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 LAMA5O15230 3695 aa8.53□□□□□ -1.04
CHFR-211ENST00000535897 A0A1W2PQF6 199 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 FAM221BA6H8Z2 402 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 EIF4E1BA6NMX2 242 aaKnown RBP8.52□□□□□ -1.05
CHFR-211ENST00000535897 PHACTR2O75167 634 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 TACC1O75410 805 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 CST3P01034 146 aaPredicted RBP8.52□□□□□ -1.05
CHFR-211ENST00000535897 MAOBP27338 520 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 SLC5A3P53794 718 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 GOLGA8FQ08AF8 430 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 GOLGA8DPQ0D2H9 430 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 SLC14A1Q13336 389 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 SNRNP35Q16560 246 aaKnown RBP8.52□□□□□ -1.05
CHFR-211ENST00000535897 TPGS1Q6ZTW0 290 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 MIB1Q86YT6 1006 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 B3GALNT2Q8NCR0 500 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 SCAMP5Q8TAC9 235 aa8.52□□□□□ -1.05
CHFR-211ENST00000535897 IPO4Q8TEX9 1081 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms