RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 HIBCHQ6NVY1 386 aaPredicted RBP19.08■□□□□ 0.64
HTATSF1-204ENST00000535601 KDM7AQ6ZMT4 941 aa19.08■□□□□ 0.64
HTATSF1-204ENST00000535601 CCDC13Q8IYE1 715 aa19.08■□□□□ 0.64
HTATSF1-204ENST00000535601 DEFB106AQ8N104 65 aa19.08■□□□□ 0.64
HTATSF1-204ENST00000535601 PNPLA4P41247 253 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 SLMAPQ14BN4 828 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 SYPL2Q5VXT5 272 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 CLEC20AQ6ZU45 233 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 KLHDC9Q8NEP7 349 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 RSAD2Q8WXG1 361 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 NRP1O14786 923 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 NUDT17P0C025 328 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 NME3Q13232 169 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 STILQ15468 1287 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 TTC39CQ8N584 583 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 PCDH19Q8TAB3 1148 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 BCAS4Q8TDM0 211 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 PCED1BQ96HM7 432 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 PCDH18Q9HCL0 1135 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 ETNK2Q9NVF9 386 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 RSPH14Q9UHP6 348 aa19.07■□□□□ 0.64
HTATSF1-204ENST00000535601 H7C0C1 242 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 DNALI1O14645 258 aaPredicted RBP19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 RASGRF2O14827 1237 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 RGS16O15492 202 aaPredicted RBP19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 AMHP03971 560 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 RPL22P35268 128 aaKnown RBP19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 ATP5OP48047 213 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 CTCFP49711 727 aaPredicted RBP19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 ACLYP53396 1101 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 DEFB115Q30KQ5 88 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 MSS51Q4VC12 460 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 DARS2Q6PI48 645 aaKnown RBP19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 PQLC3Q8N755 202 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 RAET1EQ8TD07 263 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 VGLL3A8MV65 326 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 KPNA6O60684 536 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 LRPAP1P30533 357 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 PCK1P35558 622 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 BCAR1P56945 870 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 BASP1P80723 227 aaKnown RBP19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 NOGQ13253 232 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 CYP4X1Q8N118 509 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 GPR182O15218 404 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 SHOX2O60902 331 aaPredicted RBP19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 TTC4O95801 387 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 ZBED8Q8IZ13 594 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 NKD2Q969F2 451 aaPredicted RBP19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 TNIP3Q96KP6 325 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 SYT15Q9BQS2 421 aa19.06■□□□□ 0.64
HTATSF1-204ENST00000535601 EIF3HO15372 352 aaKnown RBP eCLIP19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 LSP1P33241 339 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 CCT5P48643 541 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 GBE1Q04446 702 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 AUHQ13825 339 aaKnown RBP19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 MBTPS1Q14703 1052 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 SYDE1Q6ZW31 735 aaPredicted RBP19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 PLD5Q8N7P1 536 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 MGARPQ8TDB4 240 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 RSAD1Q9HA92 442 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 CREBZFQ9NS37 354 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 TPX2Q9ULW0 747 aaKnown RBP19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 NAALADL1Q9UQQ1 740 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 AP1G2O75843 785 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 ITGAVP06756 1048 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 USP17L7P0C7H9 530 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 NPR3P17342 541 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 WARSP23381 471 aaKnown RBP19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 GBP1P32455 592 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 TKTL1P51854 596 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 SKOR1P84550 965 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 ANKRD20A8PQ5CZ79 823 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 TOP6BLQ8N6T0 577 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 EDEM1Q92611 657 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 P3H4Q92791 437 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 RNF157Q96PX1 679 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 DUSP16Q9BY84 665 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 SRRDQ9UH36 339 aa19.05■□□□□ 0.64
HTATSF1-204ENST00000535601 CDH23Q9H251 3354 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 APOC4-APOC2K7ER74 178 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 TMEM63AO94886 807 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 APOC2P02655 101 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 OR4Q2P0C623 313 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 PTPN7P35236 360 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 MDH1P40925 334 aaKnown RBP19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 MAGEA4P43358 317 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 SULT1E1P49888 294 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 PPP2R2AP63151 447 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 FNBP1LQ5T0N5 605 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 RNASEH2BQ5TBB1 312 aaKnown RBP19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 SMOQ99835 787 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 ULBP1Q9BZM6 244 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 TMLHEQ9NVH6 421 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 DDX20Q9UHI6 824 aaKnown RBP19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 THSD7BQ9C0I4 1608 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 MCF2LO15068 1137 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 AVILO75366 819 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 GOT1P17174 413 aa19.04■□□□□ 0.64
HTATSF1-204ENST00000535601 TAZQ16635 292 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms