RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 PMS1P54277 932 aaKnown RBP9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 CACNA2D1P54289 1103 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 STX17P56962 302 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 STARD6P59095 220 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 TNK2Q07912 1038 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 ANGPT1Q15389 498 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 EDRF1Q3B7T1 1238 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 CCDC40Q4G0X9 1142 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 ZCWPW2Q504Y3 356 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 CC2D1AQ6P1N0 951 aaPredicted RBP9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 VSTM1Q6UX27 236 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 ZNF852Q6ZMS4 543 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 DENND5BQ6ZUT9 1274 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 CREBRFQ8IUR6 639 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 CCDC105Q8IYK2 499 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 CELF5Q8N6W0 485 aaKnown RBP9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 BPIFB1Q8TDL5 484 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 RHBDD1Q8TEB9 315 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 TNIP3Q96KP6 325 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 LRRC3BQ96PB8 259 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 BCO2Q9BYV7 579 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 TRPV4Q9HBA0 871 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 SPATA6Q9NWH7 488 aaPredicted RBP9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 GTSE1Q9NYZ3 720 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 STIM2Q9P246 746 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 HMGXB4Q9UGU5 601 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 CTNND2Q9UQB3 1225 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 ATP8B3O60423 1300 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 WDFY4Q6ZS81 3184 aa9.49□□□□□ -0.89
CCDC90B-219ENST00000534753 TRAV19A0A0A6YYK7 116 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 C2orf78A6NCI8 922 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 PSMA7O14818 248 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 MAPK13O15264 365 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 CHADO15335 359 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 STX10O60499 249 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 NOL4O94818 638 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 ASS1P00966 412 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 GLULP15104 373 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 TRIM21P19474 475 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 TARSP26639 723 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 ASPAP45381 313 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 MRE11P49959 708 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 MXI1P50539 228 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 NOP14P78316 857 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 FKBP3Q00688 224 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 TAGLNQ01995 201 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 LRMPQ12912 555 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 NFIL3Q16649 462 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 ARHGAP29Q52LW3 1261 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 ZNF394Q53GI3 561 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 WDR44Q5JSH3 913 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 KRT39Q6A163 491 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 TRIM68Q6AZZ1 485 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 MON1AQ86VX9 555 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 ADSSL1Q8N142 457 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 ARL14EPQ8N8R7 260 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 C12orf29Q8N999 325 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 SLC2A14Q8TDB8 520 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 NELFBQ8WX92 580 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 FAM3CQ92520 227 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 TAF4BQ92750 862 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 DNASE1L2Q92874 299 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 USP13Q92995 863 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 MYO19Q96H55 970 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 SLC22A12Q96S37 553 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 KCNK16Q96T55 309 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 ELOVL4Q9GZR5 314 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 APOBEC3GQ9HC16 384 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 TMEM8AQ9HCN3 771 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 LTB4R2Q9NPC1 389 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 GKN1Q9NS71 199 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 KRT82Q9NSB4 513 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 TDP1Q9NUW8 608 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 TRPM5Q9NZQ8 1165 aa9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 MRPS17Q9Y2R5 130 aaKnown RBP9.48□□□□□ -0.89
CCDC90B-219ENST00000534753 TICRRQ7Z2Z1 1910 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 MAN2B1O00754 1011 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 SCAMP3O14828 347 aaKnown RBP9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 NCAM2O15394 837 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 TADA3O75528 432 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 FAM163BP0C2L3 166 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 USP17L7P0C7H9 530 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 BMP2P12643 396 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 HDCP19113 662 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 DDX6P26196 483 aaKnown RBP eCLIP9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 RNF144AP50876 292 aaPredicted RBP9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 MAP3K7CLP57077 242 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 TAF10Q12962 218 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 FRMD5Q7Z6J6 570 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 FAM35AQ86V20 835 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 C1orf210Q8IVY1 113 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 NUP93Q8N1F7 819 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 FBXL13Q8NEE6 735 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 TMEM174Q8WUU8 243 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 SEMA4DQ92854 862 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 FBXO32Q969P5 355 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 TRMT2BQ96GJ1 504 aaKnown RBP9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 DHTKD1Q96HY7 919 aaPredicted RBP9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 SPATA17Q96L03 361 aa9.47□□□□□ -0.89
CCDC90B-219ENST00000534753 C8orf48Q96LL4 319 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms