RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 FCHO2Q0JRZ9 810 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 TAF3Q5VWG9 929 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 CACNA2D4Q7Z3S7 1137 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 GAS2L3Q86XJ1 694 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 PASD1Q8IV76 773 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 SIX6OS1Q8N1H7 587 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 ZFRQ96KR1 1074 aaKnown RBP12.6□□□□□ -0.39
SSBP3-214ENST00000533209 TRMT61BQ9BVS5 477 aaKnown RBP12.6□□□□□ -0.39
SSBP3-214ENST00000533209 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 KIF9Q9HAQ2 790 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 CYLDQ9NQC7 956 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 CNGB3Q9NQW8 809 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 SLC2A4RGQ9NR83 387 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 ST7Q9NRC1 585 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
SSBP3-214ENST00000533209 NAGPAQ9UK23 515 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 MYO6Q9UM54 1294 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 ARHGAP26Q9UNA1 814 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 ZNF638Q14966 1978 aaKnown RBP12.6□□□□□ -0.39
SSBP3-214ENST00000533209 DENND4CQ5VZ89 1909 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 TLR5O60602 858 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 TBX18O95935 607 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 MMEP08473 750 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 RARGP13631 454 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 CHRNB2P17787 502 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 GDI1P31150 447 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 CDH5P33151 784 aaPredicted RBP12.59□□□□□ -0.39
SSBP3-214ENST00000533209 ACADSBP45954 432 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 PSEN1P49768 467 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 DAOAP59103 153 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 YWHAGP61981 247 aaKnown RBP eCLIP12.59□□□□□ -0.39
SSBP3-214ENST00000533209 USP4Q13107 963 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 PDCLQ13371 301 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 ZNF77Q15935 545 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 FIGNQ5HY92 759 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 TMEM110Q86TL2 294 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 ZNF677Q86XU0 584 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 ARHGAP18Q8N392 663 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 ZNF276Q8N554 614 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 C1orf131Q8NDD1 294 aaKnown RBP12.59□□□□□ -0.39
SSBP3-214ENST00000533209 BPIFB1Q8TDL5 484 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 SH3RF2Q8TEC5 729 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 CLEC4CQ8WTT0 213 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 SLC20A1Q8WUM9 679 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 IRGQQ8WZA9 623 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 CPXM1Q96SM3 734 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 EDEM3Q9BZQ6 932 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 RBSNQ9H1K0 784 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 SMPD4Q9NXE4 827 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 CLIC5Q9NZA1 410 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 TJP2Q9UDY2 1190 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 CPQQ9Y646 472 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 MYH10P35580 1976 aa12.59□□□□□ -0.39
SSBP3-214ENST00000533209 ANAPC1Q9H1A4 1944 aa12.58□□□□□ -0.39
SSBP3-214ENST00000533209 LRRC53A6NM62 1247 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 YJEFN3A6XGL0 299 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 E5RJQ4 531 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 E7ENQ6 273 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 LEFTY2O00292 366 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 ARNTLO00327 626 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 MDM4O15151 490 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 CHADO15335 359 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 PAPSS1O43252 624 aaPredicted RBP12.58□□□□□ -0.4
SSBP3-214ENST00000533209 CBFA2T2O43439 604 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 FBXO21O94952 628 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 MBL2P11226 248 aaPredicted RBP12.58□□□□□ -0.4
SSBP3-214ENST00000533209 RALAP11233 206 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 FMO1Q01740 532 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 CDR2Q01850 454 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 ARID5AQ03989 594 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 SIGLEC14Q08ET2 396 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 KLHDC10Q6PID8 442 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 TRIM67Q6ZTA4 783 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 HFE2Q6ZVN8 426 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 IRF2BP2Q7Z5L9 587 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 SCUBE3Q8IX30 993 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 YAF2Q8IY57 180 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 ASIC4Q96FT7 647 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 PPP1R13BQ96KQ4 1090 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 MIS12Q9H081 205 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 BRD9Q9H8M2 597 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 NUDT5Q9UKK9 219 aa12.58□□□□□ -0.4
SSBP3-214ENST00000533209 NUP210Q8TEM1 1887 aaPredicted RBP12.57□□□□□ -0.4
SSBP3-214ENST00000533209 A0A1W2PQJ5 194 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 ZNF263O14978 683 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 AP5Z1O43299 807 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 LSM8O95777 96 aaKnown RBP12.57□□□□□ -0.4
SSBP3-214ENST00000533209 TPM3P06753 285 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 FERP16591 822 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 ATP5C1P36542 298 aaKnown RBP12.57□□□□□ -0.4
SSBP3-214ENST00000533209 NOMO3P69849 1222 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 MTF1Q14872 753 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 PTPN20Q4JDL3 420 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 ARHGAP29Q52LW3 1261 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 C10orf120Q5SQS8 335 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 IER5LQ5T953 404 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 BSPRYQ5W0U4 402 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 BTBD8Q5XKL5 378 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 E4F1Q66K89 784 aaPredicted RBP12.57□□□□□ -0.4
SSBP3-214ENST00000533209 SARM1Q6SZW1 724 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms