RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 A0A1W2PQH9 124 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 GOLGA6L6A8MZA4 724 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 C2CD4DB7Z1M9 353 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 NRG2O14511 850 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 PAPSS1O43252 624 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 TADA3O75528 432 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 AVPR1AP37288 418 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 NSFP46459 744 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 DAOAP59103 153 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 YWHAGP61981 247 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 GOLGA8FQ08AF8 430 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 GOLGA8DPQ0D2H9 430 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 CLEC16AQ2KHT3 1053 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 TJAP1Q5JTD0 557 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 HECTD3Q5T447 861 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 BTBD8Q5XKL5 378 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 HGSNATQ68CP4 663 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 OR6B2Q6IFH4 312 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 ACAD10Q6JQN1 1059 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 PPP1R2P3Q6NXS1 205 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 SCD5Q86SK9 330 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 TADA2BQ86TJ2 420 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 ZDHHC17Q8IUH5 632 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 ZDHHC14Q8IZN3 488 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 CMTM8Q8IZV2 173 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 SLC30A5Q8TAD4 765 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 ZSCAN18Q8TBC5 510 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 NDRG1Q92597 394 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 CPXM1Q96SM3 734 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 CDK5RAP1Q96SZ6 601 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 SYT11Q9BT88 431 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 NACA2Q9H009 215 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 EPS15L1Q9UBC2 864 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 ADAMTS1Q9UHI8 967 aa11.8□□□□□ -0.52
TRAPPC4-211ENST00000533012 C2orf78A6NCI8 922 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 YJEFN3A6XGL0 299 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 E7ENQ6 273 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 ERBB2P04626 1255 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 GZMAP12544 262 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 RARGP13631 454 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 MMP8P22894 467 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 WEE1P30291 646 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 GABRB2P47870 512 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 PGFP49763 221 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 TUBP50607 506 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 CENPCQ03188 943 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 PTPN20Q4JDL3 420 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 HS1BP3Q53T59 392 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 FAM78AQ5JUQ0 283 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 EFHC1Q5JVL4 640 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 STXBP5Q5T5C0 1151 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 BSPRYQ5W0U4 402 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 WDR59Q6PJI9 974 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 PHF13Q86YI8 300 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 ARID3BQ8IVW6 561 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 ZNF276Q8N554 614 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 ARL14EPQ8N8R7 260 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 TC2NQ8N9U0 490 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 SPC24Q8NBT2 197 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 RNF139Q8WU17 664 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 SMARCD2Q92925 531 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 E2F7Q96AV8 911 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 CYP2S1Q96SQ9 504 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 TRIM62Q9BVG3 475 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 DEF6Q9H4E7 631 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 NMUR1Q9HB89 426 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 ABCC13Q9NSE7 274 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 ADAM22Q9P0K1 906 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 ARHGAP20Q9P2F6 1191 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 LIMD1Q9UGP4 676 aa11.79□□□□□ -0.52
TRAPPC4-211ENST00000533012 FAM170AA1A519 330 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 TMCO5BA8MYB1 307 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 LOC730098B7Z3J9 87 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 DDX3XO00571 662 aaKnown RBP eCLIP11.78□□□□□ -0.528e-12■■■■□ 21.2
TRAPPC4-211ENST00000533012 DPYSL4O14531 572 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 CAPN9O14815 690 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 COCHO43405 550 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 TLR5O60602 858 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 OAS1P00973 400 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 LTFP02788 710 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 CKMP06732 381 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 GLI1P08151 1106 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 PLEKP08567 350 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 ATP5C1P36542 298 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 EIF4A3P38919 411 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 YWHAZP63104 245 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 CDK17Q00537 523 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 SLC6A3Q01959 620 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 ZP2Q05996 745 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 ZNF268Q14587 947 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 KLHDC10Q6PID8 442 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 POTEHQ6S545 545 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 MMS22LQ6ZRQ5 1243 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 TOGARAM2Q6ZUX3 1019 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 MTSS1LQ765P7 747 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 RSRC2Q7L4I2 434 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 BHLHA9Q7RTU4 235 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 CLEC4CQ8WTT0 213 aa11.78□□□□□ -0.52
TRAPPC4-211ENST00000533012 NXPE3Q969Y0 559 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms