RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 CCSER2Q9H7U1 834 aa26.1■■□□□ 1.77
USP48-214ENST00000532737 OBSL1O75147 1896 aa26.09■■□□□ 1.77
USP48-214ENST00000532737 CKMP06732 381 aa26.09■■□□□ 1.77
USP48-214ENST00000532737 TPM3P06753 285 aa26.09■■□□□ 1.77
USP48-214ENST00000532737 CHRNB2P17787 502 aa26.09■■□□□ 1.77
USP48-214ENST00000532737 HECTD3Q5T447 861 aa26.09■■□□□ 1.77
USP48-214ENST00000532737 NUP58Q9BVL2 599 aa26.09■■□□□ 1.77
USP48-214ENST00000532737 PDCL3Q9H2J4 239 aa26.09■■□□□ 1.77
USP48-214ENST00000532737 ST7Q9NRC1 585 aa26.09■■□□□ 1.77
USP48-214ENST00000532737 MYO6Q9UM54 1294 aa26.09■■□□□ 1.77
USP48-214ENST00000532737 SORCS3Q9UPU3 1222 aa26.09■■□□□ 1.77
USP48-214ENST00000532737 CCL26Q9Y258 94 aa26.09■■□□□ 1.77
USP48-214ENST00000532737 DENND4CQ5VZ89 1909 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 LRRC53A6NM62 1247 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 HEPACAM2A8MVW5 462 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 OLFM2O95897 454 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 MMEP08473 750 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 PFKLP17858 780 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 PLCB2Q00722 1185 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 VITQ6UXI7 678 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 C1orf131Q8NDD1 294 aaKnown RBP26.08■■□□□ 1.77
USP48-214ENST00000532737 ANP32EQ9BTT0 268 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 CNGB3Q9NQW8 809 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 TDP1Q9NUW8 608 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 NAGPAQ9UK23 515 aa26.08■■□□□ 1.77
USP48-214ENST00000532737 COCHO43405 550 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 NARSO43776 548 aaKnown RBP26.07■■□□□ 1.76
USP48-214ENST00000532737 FERP16591 822 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 TUBP50607 506 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 DAOAP59103 153 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 CDR2Q01850 454 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 PDCLQ13371 301 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 SARM1Q6SZW1 724 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 IRF2BP2Q7Z5L9 587 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 TMEM110Q86TL2 294 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 ZNF677Q86XU0 584 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 SCML4Q8N228 414 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 CELF5Q8N6W0 485 aaKnown RBP26.07■■□□□ 1.76
USP48-214ENST00000532737 E2F7Q96AV8 911 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 MIS12Q9H081 205 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.07■■□□□ 1.76
USP48-214ENST00000532737 TJP2Q9UDY2 1190 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 ANAPC1Q9H1A4 1944 aa26.07■■□□□ 1.76
USP48-214ENST00000532737 DPYSL4O14531 572 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 TLR5O60602 858 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 TBX18O95935 607 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 RARGP13631 454 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 CDH5P33151 784 aaPredicted RBP26.06■■□□□ 1.76
USP48-214ENST00000532737 ACADSBP45954 432 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 PSEN1P49768 467 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 YWHAGP61981 247 aaKnown RBP eCLIP26.06■■□□□ 1.76
USP48-214ENST00000532737 SLC7A9P82251 487 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 GRM2Q14416 872 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 ZNF268Q14587 947 aaPredicted RBP26.06■■□□□ 1.76
USP48-214ENST00000532737 E4F1Q66K89 784 aaPredicted RBP26.06■■□□□ 1.76
USP48-214ENST00000532737 HFE2Q6ZVN8 426 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 MFSD6LQ8IWD5 586 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 SCUBE3Q8IX30 993 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 RIN3Q8TB24 985 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 CLEC4CQ8WTT0 213 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 CPXM1Q96SM3 734 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 CYLDQ9NQC7 956 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 OBP2AQ9NY56 170 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 CLIC5Q9NZA1 410 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 ARHGAP26Q9UNA1 814 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 ITIH6Q6UXX5 1313 aa26.06■■□□□ 1.76
USP48-214ENST00000532737 A0A1W2PQJ5 194 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 YJEFN3A6XGL0 299 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 E5RJQ4 531 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 E7ENQ6 273 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 ZXDBP98169 803 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 FMO1Q01740 532 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 ARHGAP18Q8N392 663 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 TMEM35BQ8NCS4 154 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 CPLX3Q8WVH0 158 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 PPP1R13BQ96KQ4 1090 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 NUDT5Q9UKK9 219 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 CEP83Q9Y592 693 aa26.05■■□□□ 1.76
USP48-214ENST00000532737 PAPSS1O43252 624 aaPredicted RBP26.04■■□□□ 1.76
USP48-214ENST00000532737 FBXO21O94952 628 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 MBL2P11226 248 aaPredicted RBP26.04■■□□□ 1.76
USP48-214ENST00000532737 PSMC3P17980 439 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 GPC5P78333 572 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 ZXDAP98168 799 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 SFMBT2Q5VUG0 894 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 VSTM4Q8IW00 320 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 DEPDC1BQ8WUY9 529 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 IRGQQ8WZA9 623 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 PCDHB18PQ96TA0 734 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 SMPD4Q9NXE4 827 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 AIPL1Q9NZN9 384 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 CAPN11Q9UMQ6 739 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 DUSP12Q9UNI6 340 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 CPQQ9Y646 472 aa26.04■■□□□ 1.76
USP48-214ENST00000532737 FAM170AA1A519 330 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 LSM8O95777 96 aaKnown RBP26.03■■□□□ 1.76
USP48-214ENST00000532737 GYPCP04921 128 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 CCDC172P0C7W6 258 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 NOMO3P69849 1222 aa26.03■■□□□ 1.76
USP48-214ENST00000532737 ASIC2Q16515 512 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms