RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 SMOQ99835 787 aa13.57□□□□□ -0.24
TM9SF1-211ENST00000531406 KRT82Q9NSB4 513 aa13.57□□□□□ -0.24
TM9SF1-211ENST00000531406 ANGPTL2Q9UKU9 493 aa13.57□□□□□ -0.24
TM9SF1-211ENST00000531406 KMT2BQ9UMN6 2715 aaPredicted RBP13.57□□□□□ -0.24
TM9SF1-211ENST00000531406 C4orf47A7E2U8 309 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 KHNYNO15037 678 aaKnown RBP13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 HOXC11O43248 304 aaPredicted RBP13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 KCNK5O95279 499 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 NR3C1P04150 777 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 RPN1P04843 607 aaKnown RBP13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 CCDC130P13994 396 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 PGFP49763 221 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 NDST1P52848 882 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 ORC1Q13415 861 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 EOGTQ5NDL2 527 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 BTBD8Q5XKL5 378 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 SV2AQ7L0J3 742 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 CYP2U1Q7Z449 544 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 UNC93AQ86WB7 457 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 BBS7Q8IWZ6 715 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 ETFBKMTQ8IXQ9 262 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 PHTF2Q8N3S3 785 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 ZMIZ2Q8NF64 920 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 SLC2A14Q8TDB8 520 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 TAF4BQ92750 862 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 WBP2Q969T9 261 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 DUSP9Q99956 384 aaKnown RBP13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 NACA2Q9H009 215 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 CSNK1G1Q9HCP0 422 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 POLMQ9NP87 494 aaPredicted RBP13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 ZDHHC4Q9NPG8 344 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 HMGXB4Q9UGU5 601 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 SH3BP1Q9Y3L3 701 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 CHD8Q9HCK8 2581 aa13.56□□□□□ -0.24
TM9SF1-211ENST00000531406 LNP1A1A4G5 178 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 TBC1D3BA6NDS4 549 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 IKBKBO14920 756 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 TLR5O60602 858 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 ADAM23O75077 832 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 TULP3O75386 442 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 BEST1O76090 585 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 ASS1P00966 412 aaKnown RBP13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 P2RY2P41231 377 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 DHPSP49366 369 aaPredicted RBP13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 MAP3K7CLP57077 242 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 ST3GAL2Q16842 350 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 C1orf220Q5T0J3 134 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 SPOPLQ6IQ16 392 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 TMEM25Q86YD3 366 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 NAT16Q8N8M0 369 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 C12orf29Q8N999 325 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 WHAMMQ8TF30 809 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 RLN3Q8WXF3 142 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 SPHK2Q9NRA0 654 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 DEC1Q9P2X7 70 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 ZDHHC9Q9Y397 364 aa13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 TPRP12270 2363 aaKnown RBP13.55□□□□□ -0.24
TM9SF1-211ENST00000531406 A0A1B0GVL5 298 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 PATE3B3GLJ2 98 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 MAP3K13O43283 966 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 TBX18O95935 607 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 HLA-DRAP01903 254 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 IRF1P10914 325 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 PFKFB1P16118 471 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 CMA1P23946 247 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 ASPAP45381 313 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 SHC2P98077 582 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 ANO4Q32M45 955 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 PREPLQ4J6C6 727 aaPredicted RBP13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 DAB2IPQ5VWQ8 1189 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 CEP135Q66GS9 1140 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 PSAPL1Q6NUJ1 521 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 HTR3DQ70Z44 454 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 LPCAT2Q7L5N7 544 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 FRMD1Q8N878 549 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 KCNV2Q8TDN2 545 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 HMGB4Q8WW32 186 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 PIGKQ92643 395 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 FBXO44Q9H4M3 255 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 FAM49BQ9NUQ9 324 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 BCCIPQ9P287 314 aaKnown RBP eCLIP13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 USP25Q9UHP3 1055 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 MBD1Q9UIS9 605 aaPredicted RBP13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 TRAF3IP3Q9Y228 551 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 FRMD4BQ9Y2L6 1034 aa13.54□□□□□ -0.24
TM9SF1-211ENST00000531406 GREB1Q4ZG55 1949 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 ANAPC1Q9H1A4 1944 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 TCRBV21S2A2A0A5A6 115 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 GOLGA6L22H0YM25 854 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 TRIM24O15164 1050 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 CALUO43852 315 aaPredicted RBP13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 GREM1O60565 184 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 MYL1P05976 194 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 FAM200BP0CF97 657 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 ADORA2BP29275 332 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 PIK3CAP42336 1068 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 IRX4P78413 519 aa13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 BYSLQ13895 437 aaKnown RBP13.53□□□□□ -0.24
TM9SF1-211ENST00000531406 MAP7D1Q3KQU3 841 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms