RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SFTPA1Q8IWL2 248 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 GUF1Q8N442 669 aaKnown RBP16.7■□□□□ 0.26
CPSF1-205ENST00000531042 CCDC33Q8N5R6 958 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 DUSP9Q99956 384 aaKnown RBP16.7■□□□□ 0.26
CPSF1-205ENST00000531042 GOLPH3LQ9H4A5 285 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 FBXO44Q9H4M3 255 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.7■□□□□ 0.262e-8■■■■■ 75.8
CPSF1-205ENST00000531042 SH3BP1Q9Y3L3 701 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 ATP6V1DQ9Y5K8 247 aa16.7■□□□□ 0.26
CPSF1-205ENST00000531042 KAT7O95251 611 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 APODP05090 189 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 CHRM1P11229 460 aaPredicted RBP16.69■□□□□ 0.26
CPSF1-205ENST00000531042 KRT13P13646 458 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 RPL13P26373 211 aaKnown RBP16.69■□□□□ 0.26
CPSF1-205ENST00000531042 ADORA2BP29275 332 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 PSMC2P35998 433 aaKnown RBP16.69■□□□□ 0.26
CPSF1-205ENST00000531042 GAD2Q05329 585 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 ELF2Q15723 593 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 LY6G5CQ5SRR4 150 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 RASSF3Q86WH2 238 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 FAM186BQ8IYM0 893 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 C12orf50Q8NA57 414 aaPredicted RBP16.69■□□□□ 0.26
CPSF1-205ENST00000531042 TAS1R2Q8TE23 839 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 WBP2Q969T9 261 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 TWNKQ96RR1 684 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 HNRNPABQ99729 332 aaKnown RBP16.69■□□□□ 0.26
CPSF1-205ENST00000531042 IMPG2Q9BZV3 1241 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 CYP3A43Q9HB55 503 aa16.69■□□□□ 0.26
CPSF1-205ENST00000531042 APOBEC3GQ9HC16 384 aaKnown RBP16.69■□□□□ 0.26
CPSF1-205ENST00000531042 TLR8Q9NR97 1041 aaKnown RBP16.69■□□□□ 0.26
CPSF1-205ENST00000531042 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.68■□□□□ 0.26
CPSF1-205ENST00000531042 HHLA1C9JL84 531 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 TLR5O60602 858 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 RHOBTB1O94844 696 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 ZNF202O95125 648 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 FAM200BP0CF97 657 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 TRIM21P19474 475 aaKnown RBP16.68■□□□□ 0.26
CPSF1-205ENST00000531042 MPLP40238 635 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 GRIA2P42262 883 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 KIR2DL1P43626 348 aaPredicted RBP16.68■□□□□ 0.26
CPSF1-205ENST00000531042 LIMK1P53667 647 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 MCCD1P59942 119 aaPredicted RBP16.68■□□□□ 0.26
CPSF1-205ENST00000531042 ADAM9Q13443 819 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 CRY1Q16526 586 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 ZCWPW2Q504Y3 356 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 USP39Q53GS9 565 aaKnown RBP16.68■□□□□ 0.26
CPSF1-205ENST00000531042 ANO7Q6IWH7 933 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 TMEM92Q6UXU6 159 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 CLEC20AQ6ZU45 233 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 GPRIN1Q7Z2K8 1008 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 BBS7Q8IWZ6 715 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 PHTF2Q8N3S3 785 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 ALLCQ8N6M5 410 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 IL17RCQ8NAC3 791 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 CYFIP2Q96F07 1278 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 CNOT6LQ96LI5 555 aaKnown RBP16.68■□□□□ 0.26
CPSF1-205ENST00000531042 NT5C1AQ9BXI3 368 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 TPSD1Q9BZJ3 242 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 NIF3L1Q9GZT8 377 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 NACA2Q9H009 215 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 SMOC1Q9H4F8 434 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 ARHGEF4Q9NR80 690 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 VPS45Q9NRW7 570 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 RXFP3Q9NSD7 469 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 INVSQ9Y283 1065 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 SPTBN2O15020 2390 aa16.68■□□□□ 0.26
CPSF1-205ENST00000531042 KLF8O95600 359 aaPredicted RBP16.67■□□□□ 0.26
CPSF1-205ENST00000531042 IRF1P10914 325 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 HNRNPLP14866 589 aaKnown RBP eCLIP16.67■□□□□ 0.26
CPSF1-205ENST00000531042 TIE1P35590 1138 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 TNFRSF4P43489 277 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 KDSRQ06136 332 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 HSF5Q4G112 596 aaPredicted RBP16.67■□□□□ 0.26
CPSF1-205ENST00000531042 PPM1JQ5JR12 505 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 EMC10Q5UCC4 262 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 ETFBKMTQ8IXQ9 262 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 TXNDC5Q8NBS9 432 aaKnown RBP16.67■□□□□ 0.26
CPSF1-205ENST00000531042 MDGA1Q8NFP4 955 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 WHAMMQ8TF30 809 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 KLF16Q9BXK1 252 aaPredicted RBP16.67■□□□□ 0.26
CPSF1-205ENST00000531042 MMRN2Q9H8L6 949 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 TMEM8AQ9HCN3 771 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 CYLDQ9NQC7 956 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 SPHK2Q9NRA0 654 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 SCML2Q9UQR0 700 aa16.67■□□□□ 0.26
CPSF1-205ENST00000531042 SGK1O00141 431 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 HOXC11O43248 304 aaPredicted RBP16.66■□□□□ 0.26
CPSF1-205ENST00000531042 CILPO75339 1184 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 TBX18O95935 607 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 ADRB1P08588 477 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 CD58P19256 250 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 GBP1P32455 592 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 GTF2H1P32780 548 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 EDRF1Q3B7T1 1238 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 BTBD8Q5XKL5 378 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 IL31Q6EBC2 164 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 HTR3DQ70Z44 454 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 C11orf74Q86VG3 221 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 TMEM25Q86YD3 366 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 NAT16Q8N8M0 369 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms