RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 ATXN3LQ9H3M9 355 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 POMKQ9H5K3 350 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 GMIPQ9P107 970 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 MRPS23Q9Y3D9 190 aaKnown RBP17.79■□□□□ 0.44
SF3B2-211ENST00000531041 ZNF840PA6NDX5 716 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 AKR1B10O60218 316 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
SF3B2-211ENST00000531041 ALKBH5Q6P6C2 394 aaKnown RBP17.78■□□□□ 0.44
SF3B2-211ENST00000531041 MON1BQ7L1V2 547 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 SCD5Q86SK9 330 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 TMEM139Q8IV31 216 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 CCDC170Q8IYT3 715 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 ARHGAP18Q8N392 663 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 ZNF276Q8N554 614 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 ITFG1Q8TB96 612 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 NDRG1Q92597 394 aaKnown RBP17.78■□□□□ 0.44
SF3B2-211ENST00000531041 MRPS31Q92665 395 aaKnown RBP17.78■□□□□ 0.44
SF3B2-211ENST00000531041 BAG1Q99933 345 aaPredicted RBP17.78■□□□□ 0.44
SF3B2-211ENST00000531041 PRDM6Q9NQX0 595 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 ADAM22Q9P0K1 906 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 ZMYM5Q9UJ78 669 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 STRIP2Q9ULQ0 834 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 NENFQ9UMX5 172 aa17.78■□□□□ 0.44
SF3B2-211ENST00000531041 YJEFN3A6XGL0 299 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 SOBPA7XYQ1 873 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 TMCO5BA8MYB1 307 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 E7ENQ6 273 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 NRG2O14511 850 aaPredicted RBP17.77■□□□□ 0.44
SF3B2-211ENST00000531041 FTLP02792 175 aaPredicted RBP17.77■□□□□ 0.44
SF3B2-211ENST00000531041 CALB1P05937 261 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 PGFP49763 221 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 GSCP56915 257 aaPredicted RBP17.77■□□□□ 0.44
SF3B2-211ENST00000531041 TFF2Q03403 129 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 GFPT1Q06210 699 aaPredicted RBP17.77■□□□□ 0.44
SF3B2-211ENST00000531041 ZNF268Q14587 947 aaPredicted RBP17.77■□□□□ 0.44
SF3B2-211ENST00000531041 C2CD6Q53TS8 623 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 MMS22LQ6ZRQ5 1243 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 FAM183BPQ6ZVS7 135 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 XYLT1Q86Y38 959 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 MCOLN2Q8IZK6 566 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 CLEC4CQ8WTT0 213 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 C11orf70Q9BRQ4 267 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 NMUR1Q9HB89 426 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 CLIC5Q9NZA1 410 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.77■□□□□ 0.44
SF3B2-211ENST00000531041 WDR35Q9P2L0 1181 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 THEGQ9P2T0 379 aa17.77■□□□□ 0.44
SF3B2-211ENST00000531041 A0A1W2PQH9 124 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 FAM170AA1A519 330 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 GLI1P08151 1106 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 GJA1P17302 382 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 CEBPBP17676 345 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 PFKLP17858 780 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 DDX6P26196 483 aaKnown RBP eCLIP17.76■□□□□ 0.43
SF3B2-211ENST00000531041 SCNN1AP37088 669 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 YWHAGP61981 247 aaKnown RBP eCLIP17.76■□□□□ 0.43
SF3B2-211ENST00000531041 SLC6A3Q01959 620 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 TEAD2Q15562 447 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 SMAD2Q15796 467 aaKnown RBP17.76■□□□□ 0.43
SF3B2-211ENST00000531041 AAK1Q2M2I8 961 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 ARHGAP15Q53QZ3 475 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 EFHC1Q5JVL4 640 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 CCDC122Q5T0U0 273 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 OR6B2Q6IFH4 312 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 OLFML1Q6UWY5 402 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 TOGARAM2Q6ZUX3 1019 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 MCRS1Q96EZ8 462 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 OSER1Q9NX31 292 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 FAM50BQ9Y247 325 aa17.76■□□□□ 0.43
SF3B2-211ENST00000531041 LCA5LO95447 670 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 ABL1P00519 1130 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 LTFP02788 710 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 CYLC1P35663 651 aaPredicted RBP17.75■□□□□ 0.43
SF3B2-211ENST00000531041 TUBP50607 506 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 CYP4F8P98187 520 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 BSPRYQ5W0U4 402 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 PTCRAQ6ISU1 281 aaPredicted RBP17.75■□□□□ 0.43
SF3B2-211ENST00000531041 BEND5Q7L4P6 421 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 GET4Q7L5D6 327 aaPredicted RBP17.75■□□□□ 0.43
SF3B2-211ENST00000531041 SLC26A9Q7LBE3 791 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 LRRC8AQ8IWT6 810 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 FGF13Q92913 245 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 PIWIL1Q96J94 861 aaKnown RBP17.75■□□□□ 0.43
SF3B2-211ENST00000531041 TASP1Q9H6P5 420 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 ABCC13Q9NSE7 274 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 SPTLC3Q9NUV7 552 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.75■□□□□ 0.433e-8■■■□□ 17.5
SF3B2-211ENST00000531041 ASNSD1Q9NWL6 643 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 GDE1Q9NZC3 331 aa17.75■□□□□ 0.43
SF3B2-211ENST00000531041 SPTBN5Q9NRC6 3674 aaKnown RBP17.75■□□□□ 0.43
SF3B2-211ENST00000531041 TCF20Q9UGU0 1960 aaKnown RBP17.74■□□□□ 0.43
SF3B2-211ENST00000531041 SOWAHDA6NJG2 315 aa17.74■□□□□ 0.43
SF3B2-211ENST00000531041 OAS1P00973 400 aaKnown RBP17.74■□□□□ 0.43
SF3B2-211ENST00000531041 YWHAZP63104 245 aaKnown RBP17.74■□□□□ 0.43
SF3B2-211ENST00000531041 HECTD3Q5T447 861 aa17.74■□□□□ 0.43
SF3B2-211ENST00000531041 GPR158Q5T848 1215 aa17.74■□□□□ 0.43
SF3B2-211ENST00000531041 TXNDC8Q6A555 127 aa17.74■□□□□ 0.43
SF3B2-211ENST00000531041 HFE2Q6ZVN8 426 aa17.74■□□□□ 0.43
SF3B2-211ENST00000531041 NPAS3Q8IXF0 933 aa17.74■□□□□ 0.43
SF3B2-211ENST00000531041 MAB21L3Q8N8X9 362 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms