RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 FHL3Q13643 280 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 CLCA4Q14CN2 919 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 TRIM71Q2Q1W2 868 aaKnown RBP6.97□□□□□ -1.29
CASP4-208ENST00000530309 ZXDCQ2QGD7 858 aaPredicted RBP6.97□□□□□ -1.29
CASP4-208ENST00000530309 PLAC9Q5JTB6 97 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 GATAD2AQ86YP4 633 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 FSTL5Q8N475 847 aaPredicted RBP6.97□□□□□ -1.29
CASP4-208ENST00000530309 C11orf44Q8N8P7 122 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 SPATA5Q8NB90 893 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 XAGE5Q8WWM1 108 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 LARP4BQ92615 738 aaKnown RBP6.97□□□□□ -1.29
CASP4-208ENST00000530309 HAPLN3Q96S86 360 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 MYLK2Q9H1R3 596 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 MAGEH1Q9H213 219 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 STEAP1Q9UHE8 339 aa6.97□□□□□ -1.29
CASP4-208ENST00000530309 GRID2IPA4D2P6 1211 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 ZSCAN9O15535 394 aaPredicted RBP6.96□□□□□ -1.3
CASP4-208ENST00000530309 ASNA1O43681 348 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 TNFRSF6BO95407 300 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 LMNAP02545 664 aaKnown RBP6.96□□□□□ -1.3
CASP4-208ENST00000530309 HTR7P34969 479 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 PDE1AP54750 535 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 ABHD18Q0P651 414 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 PUM1Q14671 1186 aaKnown RBP eCLIP6.96□□□□□ -1.3
CASP4-208ENST00000530309 USP51Q70EK9 711 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 METTL25Q8N6Q8 603 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 SUN3Q8TAQ9 357 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 EID2BQ96D98 161 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 WDR24Q96S15 920 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 DPCDQ9BVM2 203 aaPredicted RBP6.96□□□□□ -1.3
CASP4-208ENST00000530309 ARHGEF3Q9NR81 526 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 LRIT1Q9P2V4 623 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 GRHPRQ9UBQ7 328 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 NKX1-2Q9UD57 310 aaPredicted RBP6.96□□□□□ -1.3
CASP4-208ENST00000530309 GABRQQ9UN88 632 aa6.96□□□□□ -1.3
CASP4-208ENST00000530309 SCAF8Q9UPN6 1271 aaKnown RBP6.96□□□□□ -1.3
CASP4-208ENST00000530309 CCDC151A5D8V7 595 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 TRIM38O00635 465 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 PCDH17O14917 1159 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 URI1O94763 535 aaPredicted RBP6.95□□□□□ -1.3
CASP4-208ENST00000530309 USP1O94782 785 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 PRKCBP05771 671 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 ADRA1BP35368 520 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 GRIA3P42263 894 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 FOXI1Q12951 378 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 ZNF551Q7Z340 670 aaPredicted RBP6.95□□□□□ -1.3
CASP4-208ENST00000530309 BEND2Q8NDZ0 799 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 RP9Q8TA86 221 aaKnown RBP6.95□□□□□ -1.3
CASP4-208ENST00000530309 ACTRT2Q8TDY3 377 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 NUDT22Q9BRQ3 303 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 KATNAL1Q9BW62 490 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 SERTAD4Q9NUC0 356 aa6.95□□□□□ -1.3
CASP4-208ENST00000530309 DLDP09622 509 aaKnown RBP6.94□□□□□ -1.3
CASP4-208ENST00000530309 TACR2P21452 398 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 YY1P25490 414 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 PCSK6P29122 969 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 GKP32189 559 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 ALDH18A1P54886 795 aaKnown RBP6.94□□□□□ -1.3
CASP4-208ENST00000530309 TPTEP56180 551 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 POLE2P56282 527 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 ZNF627Q7L945 461 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 PEG10Q86TG7 708 aaKnown RBP6.94□□□□□ -1.3
CASP4-208ENST00000530309 LRRC71Q8N4P6 559 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 TRAPPC12Q8WVT3 735 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 SLC9A6Q92581 669 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 PAGR1Q9BTK6 254 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 TMEM120AQ9BXJ8 343 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 TP63Q9H3D4 680 aaPredicted RBP6.94□□□□□ -1.3
CASP4-208ENST00000530309 EPS8L2Q9H6S3 715 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 CCNL1Q9UK58 526 aaPredicted RBP6.94□□□□□ -1.3
CASP4-208ENST00000530309 SALL3Q9BXA9 1300 aa6.94□□□□□ -1.3
CASP4-208ENST00000530309 TMEM191CA6NGB0 347 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 J3KTA2 159 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 M0R3H8 397 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 KIAA0355O15063 1070 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 DHHO43323 396 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 CBFA2T3O75081 653 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 PMPCBO75439 489 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 WDR47O94967 919 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 ANXA6P08133 673 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 ITGA2BP08514 1039 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 JUPP14923 745 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 VEGFAP15692 232 aaPredicted RBP6.93□□□□□ -1.3
CASP4-208ENST00000530309 EIF4A1P60842 406 aaKnown RBP6.93□□□□□ -1.3
CASP4-208ENST00000530309 ACOX1Q15067 660 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 CYP1B1Q16678 543 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 ST3GAL2Q16842 350 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 HECTD2Q5U5R9 776 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 Q6ZPA2 131 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 Q6ZWC4 215 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 PARS2Q7L3T8 475 aaKnown RBP6.93□□□□□ -1.3
CASP4-208ENST00000530309 WDR53Q7Z5U6 358 aaPredicted RBP6.93□□□□□ -1.3
CASP4-208ENST00000530309 MYRIPQ8NFW9 859 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 STT3BQ8TCJ2 826 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 NEU4Q8WWR8 484 aaPredicted RBP6.93□□□□□ -1.3
CASP4-208ENST00000530309 WDYHV1Q96HA8 205 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 PDLIM2Q96JY6 352 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 ISCA1Q9BUE6 129 aa6.93□□□□□ -1.3
CASP4-208ENST00000530309 SORBS1Q9BX66 1292 aaKnown RBP6.93□□□□□ -1.3
CASP4-208ENST00000530309 HERC5Q9UII4 1024 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms