RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 SCP2P22307 547 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 PROZP22891 400 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 HOXD13P35453 343 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 WDR5P61964 334 aaKnown RBP9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 DEFB103AP81534 67 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 KCNB1Q14721 858 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 PPP2R5DQ14738 602 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 MAPK6Q16659 721 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 BMT2Q1RMZ1 405 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 ZC2HC1CQ53FD0 456 aaPredicted RBP9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 FAM109BQ6ICB4 259 aaPredicted RBP9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 SLC39A4Q6P5W5 647 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.55□□□□□ -0.887e-9■■■■■ 34.2
CCDC90B-217ENST00000530253 OTOP2Q7RTS6 562 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 DDX1Q92499 740 aaKnown RBP9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 HVCN1Q96D96 273 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 FTHL17Q9BXU8 183 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 IKZF4Q9H2S9 585 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 PDZD7Q9H5P4 517 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 PTPRHQ9HD43 1115 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 CHST12Q9NRB3 414 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 RGS18Q9NS28 235 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 TBC1D7Q9P0N9 293 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 KCNG1Q9UIX4 513 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 TBX20Q9UMR3 447 aa9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 PIN4Q9Y237 131 aaKnown RBP9.55□□□□□ -0.88
CCDC90B-217ENST00000530253 MYH11P35749 1972 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 GBF1Q92538 1859 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 GRXCR1A8MXD5 290 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 H0YCG3 227 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 K7ERI5 159 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 CBFA2T2O43439 604 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 EFCAB14O75071 495 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 ERLIN2O94905 339 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 MBD3O95983 291 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 ACTN1P12814 892 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 AXLP30530 894 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 FAM189BP81408 668 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 STK4Q13043 487 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 PRPF4BQ13523 1007 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 COL9A2Q14055 689 aaPredicted RBP9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 L1TD1Q5T7N2 865 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 CDR2LQ86X02 465 aaPredicted RBP9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 TTC9BQ8N6N2 239 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 SLC17A8Q8NDX2 589 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 SCFD1Q8WVM8 642 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 CCDC51Q96ER9 411 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 CPB2Q96IY4 423 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 RNPC3Q96LT9 517 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 ACO2Q99798 780 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 ADAM2Q99965 735 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 TARS2Q9BW92 718 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 EIF2AQ9BY44 585 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 HAPLN2Q9GZV7 340 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 MRPL44Q9H9J2 332 aaKnown RBP9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 EXOC1Q9NV70 894 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 TNFSF13BQ9Y275 285 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 GDAQ9Y2T3 454 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 RWDD3Q9Y3V2 267 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 UBE4BO95155 1302 aa9.54□□□□□ -0.88
CCDC90B-217ENST00000530253 A0A0U1RQF3 1178 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 TISP43B9A030 160 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 EIF3DO15371 548 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 GCNT3O95395 438 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 ALCAMQ13740 583 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 ATF7IP2Q5U623 682 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 HEATR6Q6AI08 1181 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 NOTUMQ6P988 496 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 SLC27A1Q6PCB7 646 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 RBM43Q6ZSC3 357 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 TMCO2Q7Z6W1 182 aaPredicted RBP9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 ZNF761Q86XN6 746 aaPredicted RBP9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 ECHDC2Q86YB7 292 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 ZBTB8AQ96BR9 441 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 CCDC34Q96HJ3 373 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 GSDMAQ96QA5 445 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 MRPL4Q9BYD3 311 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 CDT1Q9H211 546 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 SLC39A2Q9NP94 309 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 METTL5Q9NRN9 209 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 C1orf112Q9NSG2 853 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 MTMR10Q9NXD2 777 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 MAN1B1Q9UKM7 699 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 STYXL1Q9Y6J8 313 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 DUSP10Q9Y6W6 482 aa9.53□□□□□ -0.88
CCDC90B-217ENST00000530253 ANKRD63C9JTQ0 380 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 MEFVO15553 781 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 TGFB1I1O43294 461 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 FAM189A1O60320 539 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 ZNF623O75123 536 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 TOM1L1O75674 476 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 PPM1BO75688 479 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 PRPF6O94906 941 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 ADSSP30520 456 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 ABCD1P33897 745 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 MCL1Q07820 350 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 STRN3Q13033 797 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 MORC3Q14149 939 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 CAMK4Q16566 473 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms