RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	TTC30A	Q86WT1	665 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	C2CD5	Q86YS7	1000 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	TMPRSS6	Q8IU80	811 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	CPO	Q8IVL8	374 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	IZUMO1	Q8IYV9	350 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	SLC30A5	Q8TAD4	765 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	AFG1L	Q8WV93	481 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	OSCP1	Q8WVF1	389 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	ATRIP	Q8WXE1	791 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	THAP4	Q8WY91	577 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	ATG4A	Q8WYN0	398 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	HERVK_113	Q902F9	699 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	RNF31	Q96EP0	1072 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	MAEL	Q96JY0	434 aa	Known RBP	4.55	□□□□□ -1.68
RDX-208	ENST00000530085	WDR24	Q96S15	920 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	ADO	Q96SZ5	270 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	C17orf80	Q9BSJ5	609 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	TPSD1	Q9BZJ3	242 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	TWSG1	Q9GZX9	223 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	VPS16	Q9H269	839 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	UNKL	Q9H9P5	680 aa	Known RBP	4.55	□□□□□ -1.68
RDX-208	ENST00000530085	IFT80	Q9P2H3	777 aa	Predicted RBP	4.55	□□□□□ -1.68
RDX-208	ENST00000530085	SLC27A6	Q9Y2P4	619 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	FER1L4	A9Z1Z3	1794 aa		4.55	□□□□□ -1.68
RDX-208	ENST00000530085	TISP43	B9A030	160 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085		J3KRW8	73 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	CBFA2T3	O75081	653 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	NDUFA10	O95299	355 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	RBL1	P28749	1068 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	AKT1	P31749	480 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	HTR7	P34969	479 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	BMPR1A	P36894	532 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	PAPOLA	P51003	745 aa	Known RBP	4.54	□□□□□ -1.68
RDX-208	ENST00000530085	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
RDX-208	ENST00000530085	ACTR2	P61160	394 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	ADAM17	P78536	824 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	LMOD3	Q0VAK6	560 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
RDX-208	ENST00000530085	ACOX1	Q15067	660 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	BEAN1	Q3B7T3	259 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	RETSAT	Q6NUM9	610 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	CLEC4G	Q6UXB4	293 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	RRAGA	Q7L523	313 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	TMTC1	Q8IUR5	882 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	CPEB3	Q8NE35	698 aa	Known RBP	4.54	□□□□□ -1.68
RDX-208	ENST00000530085	PPHLN1	Q8NEY8	458 aa	Known RBP	4.54	□□□□□ -1.68
RDX-208	ENST00000530085	CSGALNACT1	Q8TDX6	532 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	FUBP1	Q96AE4	644 aa	Known RBP	4.54	□□□□□ -1.68
RDX-208	ENST00000530085	SKA1	Q96BD8	255 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	HAPLN3	Q96S86	360 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	TTPAL	Q9BTX7	342 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	VN1R3	Q9BXE9	311 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	DEF6	Q9H4E7	631 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	VPS45	Q9NRW7	570 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.54	□□□□□ -1.68
RDX-208	ENST00000530085	TERF2IP	Q9NYB0	399 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	DKK2	Q9UBU2	259 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	SLC13A4	Q9UKG4	626 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	CNTN6	Q9UQ52	1028 aa		4.54	□□□□□ -1.68
RDX-208	ENST00000530085	TRGV11	A0A075B6L2	103 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	EFCAB8	A8MWE9	144 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	EXOC5	O00471	708 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	PLSCR1	O15162	318 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	HOXC11	O43248	304 aa	Predicted RBP	4.53	□□□□□ -1.68
RDX-208	ENST00000530085	FAM20B	O75063	409 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	PPP6R2	O75170	966 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	CDKL5	O76039	1030 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	TK1	P04183	234 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	ERBB2	P04626	1255 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	JUP	P14923	745 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	PPP3CB	P16298	524 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	TNFAIP3	P21580	790 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	ACRV1	P26436	265 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	CDK7	P50613	346 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	SEC24C	P53992	1094 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	TLE2	Q04725	743 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	CSHL1	Q14406	222 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	CLCA4	Q14CN2	919 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	PRKD1	Q15139	912 aa	Predicted RBP	4.53	□□□□□ -1.68
RDX-208	ENST00000530085	BTBD16	Q32M84	506 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	TTC22	Q5TAA0	569 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	ERICH6B	Q5W0A0	696 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	SLC9A4	Q6AI14	798 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	ANKS1B	Q7Z6G8	1248 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	FSTL5	Q8N475	847 aa	Predicted RBP	4.53	□□□□□ -1.68
RDX-208	ENST00000530085	ESX1	Q8N693	406 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	METTL25	Q8N6Q8	603 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	C11orf44	Q8N8P7	122 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	C3orf49	Q96BT1	292 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	SEC62	Q99442	399 aa	Known RBP	4.53	□□□□□ -1.68
RDX-208	ENST00000530085	SENP7	Q9BQF6	1050 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	ACTRT3	Q9BYD9	372 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	BRD8	Q9H0E9	1235 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	ELAC1	Q9H777	363 aa	Known RBP	4.53	□□□□□ -1.68
RDX-208	ENST00000530085	WASH6P	Q9NQA3	447 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.53	□□□□□ -1.68
RDX-208	ENST00000530085	STEAP1	Q9UHE8	339 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	RIMKLB	Q9ULI2	386 aa		4.53	□□□□□ -1.68
RDX-208	ENST00000530085	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.53	□□□□□ -1.68
RDX-208	ENST00000530085	DRG1	Q9Y295	367 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms