RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 PODXLO00592 558 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 ZSCAN9O15535 394 aaPredicted RBP17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 RALAP11233 206 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 WARSP23381 471 aaKnown RBP17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 ADORA2BP29275 332 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 TKTP29401 623 aaKnown RBP17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 DR1Q01658 176 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 FAM102AQ5T9C2 384 aaPredicted RBP17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 TBC1D1Q86TI0 1168 aaPredicted RBP17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 RTN4RL1Q86UN2 441 aaPredicted RBP17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 FNIP1Q8TF40 1166 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 SEC14L1Q92503 715 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 RNF25Q96BH1 459 aaPredicted RBP17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 SLC4A5Q9BY07 1137 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 NEUROG2Q9H2A3 272 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 CASTOR2A6NHX0 329 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 LRCH4O75427 683 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 POMCP01189 267 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 IL1R2P27930 398 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 CHRNA3P32297 505 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 HSPA9P38646 679 aaKnown RBP17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 KCNJ1P48048 391 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 PPP2R2AP63151 447 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 KLF1Q13351 362 aaPredicted RBP17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 TAF5Q15542 800 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 ANKRD20A2Q5SQ80 823 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 ANKRD20A1Q5TYW2 823 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 ANKRD20A3Q5VUR7 823 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 EXD1Q8NHP7 514 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 TEKT4Q8WW24 435 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 C1orf54Q8WWF1 131 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 SENP8Q96LD8 212 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 RSAD1Q9HA92 442 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 PCYOX1Q9UHG3 505 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 R3HDM2Q9Y2K5 976 aaKnown RBP17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 ASB3Q9Y575 518 aa17.46■□□□□ 0.39
CAPRIN1-207ENST00000529307 FRMPD3Q5JV73 1810 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 DAPK3O43293 454 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 VIMP08670 466 aaKnown RBP17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 ACAT1P24752 427 aaKnown RBP17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 MXRA7P84157 204 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 SLC25A11Q02978 314 aaKnown RBP17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 ITIH4Q14624 930 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 PPP2R5EQ16537 467 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 LRRC38Q5VT99 294 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 KIAA0319Q5VV43 1072 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 OR6B2Q6IFH4 312 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 CCDC137Q6PK04 289 aaKnown RBP17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 TMEM110Q86TL2 294 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 JAMLQ86YT9 394 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 C12orf50Q8NA57 414 aaPredicted RBP17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 SLC2A14Q8TDB8 520 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 ATG4AQ8WYN0 398 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 PLVAPQ9BX97 442 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 CHST7Q9NS84 486 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 MTUS1Q9ULD2 1270 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 GABRDO14764 452 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 GRAP2O75791 330 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 YY1P25490 414 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 ALDH3A1P30838 453 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 COILP38432 576 aaPredicted RBP17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 RAB6CQ53S08 254 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 AGBL2Q5U5Z8 902 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 NUGGCQ68CJ6 796 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 OLFML1Q6UWY5 402 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 ZNF598Q86UK7 904 aaKnown RBP17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 ANKRD52Q8NB46 1076 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.45■□□□□ 0.383e-6■■■■■ 50.8
CAPRIN1-207ENST00000529307 KHSRPQ92945 711 aaKnown RBP eCLIP17.45■□□□□ 0.388e-7■■■■□ 19.5
CAPRIN1-207ENST00000529307 NAF1Q96HR8 494 aaKnown RBP17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 FAM167BQ9BTA0 163 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 B3GNT5Q9BYG0 378 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.45■□□□□ 0.382e-6■□□□□ 10.1
CAPRIN1-207ENST00000529307 RAB6CQ9H0N0 254 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 UNC93B1Q9H1C4 597 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 DPH5Q9H2P9 285 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 SAGE1Q9NXZ1 904 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 HESX1Q9UBX0 185 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 PHF24Q9UPV7 400 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 TIMM13Q9Y5L4 95 aaPredicted RBP17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 SQORQ9Y6N5 450 aa17.45■□□□□ 0.38
CAPRIN1-207ENST00000529307 PAPSS1O43252 624 aaPredicted RBP17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 MYCP01106 439 aaPredicted RBP17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 NQO1P15559 274 aaKnown RBP17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 FLT3P36888 993 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 PRMT2P55345 433 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 MRPS35P82673 323 aaKnown RBP17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 DHX34Q14147 1143 aaKnown RBP17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 LBRQ14739 615 aaKnown RBP17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 UPP1Q16831 310 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 SH3PXD2AQ5TCZ1 1133 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 MFSD7Q6UXD7 560 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 SCUBE3Q8IX30 993 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 B3GALNT2Q8NCR0 500 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 LINC01599Q8WXQ3 324 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 SLITRK1Q96PX8 696 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 OSBPL8Q9BZF1 889 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 TRIM31Q9BZY9 425 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 LRRC19Q9H756 370 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms