RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 ATP2A3Q93084 1043 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 ACDQ96AP0 544 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 ITPKCQ96DU7 683 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 CDK5RAP3Q96JB5 506 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 CNOT6LQ96LI5 555 aaKnown RBP6.44□□□□□ -1.38
NUP98-215ENST00000529063 SPATA32Q96LK8 384 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 MYRFLQ96LU7 910 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 ZSCAN31Q96LW9 406 aaPredicted RBP6.44□□□□□ -1.38
NUP98-215ENST00000529063 FGFBP2Q9BYJ0 223 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 LINC00597Q9H2U6 94 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 ST6GALNAC4Q9H4F1 302 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 TMEM206Q9H813 350 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 ZNF395Q9H8N7 513 aaPredicted RBP6.44□□□□□ -1.38
NUP98-215ENST00000529063 TRPC7Q9HCX4 862 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 ABCB6Q9NP58 842 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 DUS2Q9NX74 493 aaKnown RBP6.44□□□□□ -1.38
NUP98-215ENST00000529063 SIX4Q9UIU6 781 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 GTF3C4Q9UKN8 822 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 AGO2Q9UKV8 859 aaKnown RBP6.44□□□□□ -1.38
NUP98-215ENST00000529063 NME7Q9Y5B8 376 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 ATRXP46100 2492 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 PTPRJQ12913 1337 aa6.44□□□□□ -1.38
NUP98-215ENST00000529063 CACNA1EQ15878 2313 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 SRRM3A6NNA2 597 aaPredicted RBP6.43□□□□□ -1.38
NUP98-215ENST00000529063 GABRDO14764 452 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 SLC26A4O43511 780 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 ATP2C2O75185 946 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 RHOBTB1O94844 696 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 CYP17A1P05093 508 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 ITGB3P05106 788 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 CKMP06732 381 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 USP17L7P0C7H9 530 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 CSRP1P21291 193 aaKnown RBP6.43□□□□□ -1.38
NUP98-215ENST00000529063 SCP2P22307 547 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 GBP1P32455 592 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 PLA2G4AP47712 749 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 IFNAR2P48551 515 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 CASP5P51878 434 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 IRX4P78413 519 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 TSPY1Q01534 308 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 POU5F1Q01860 360 aaKnown RBP6.43□□□□□ -1.38
NUP98-215ENST00000529063 TAF12Q16514 161 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 NFE2Q16621 373 aaPredicted RBP6.43□□□□□ -1.38
NUP98-215ENST00000529063 CFAP221Q4G0U5 840 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 C2orf27AQ580R0 203 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 PEAR1Q5VY43 1037 aaPredicted RBP6.43□□□□□ -1.38
NUP98-215ENST00000529063 MCTP1Q6DN14 999 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 ANO7Q6IWH7 933 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 KIAA1211LQ6NV74 962 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 CC2D1AQ6P1N0 951 aaPredicted RBP6.43□□□□□ -1.38
NUP98-215ENST00000529063 USP49Q70CQ1 688 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 DPH6Q7L8W6 267 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 ZNF720Q7Z2F6 126 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 LIMS2Q7Z4I7 341 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 C12orf40Q86WS4 652 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 DEFB124Q8NES8 71 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 TSTD1Q8NFU3 115 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 KBTBD7Q8WVZ9 684 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 LARP4BQ92615 738 aaKnown RBP6.43□□□□□ -1.38
NUP98-215ENST00000529063 SAAL1Q96ER3 474 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 AK8Q96MA6 479 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 ZNF560Q96MR9 790 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 FNBP1Q96RU3 617 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 ACBD6Q9BR61 282 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 SCNM1Q9BWG6 230 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 ZHX3Q9H4I2 956 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 TMEM9BQ9NQ34 198 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 CRTAC1Q9NQ79 661 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 TMEM74BQ9NUR3 256 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 TMEM30AQ9NV96 361 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 GDAP2Q9NXN4 497 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 DDX43Q9NXZ2 648 aaKnown RBP6.43□□□□□ -1.38
NUP98-215ENST00000529063 MBD1Q9UIS9 605 aaPredicted RBP6.43□□□□□ -1.38
NUP98-215ENST00000529063 MMP17Q9ULZ9 603 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 ARHGAP26Q9UNA1 814 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 AGAP1Q9UPQ3 857 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 MYO18AQ92614 2054 aaKnown RBP6.43□□□□□ -1.38
NUP98-215ENST00000529063 PCNX2A6NKB5 2137 aa6.43□□□□□ -1.38
NUP98-215ENST00000529063 CELSR3Q9NYQ7 3312 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 TRAV19A0A0A6YYK7 116 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 SGK1O00141 431 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 LEFTY2O00292 366 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 HYAL3O43820 417 aaPredicted RBP6.42□□□□□ -1.38
NUP98-215ENST00000529063 ADAM23O75077 832 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 TBCAO75347 108 aaKnown RBP6.42□□□□□ -1.38
NUP98-215ENST00000529063 IL18RAPO95256 599 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 NFATC1O95644 943 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 OLFM2O95897 454 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 CAPNS1P04632 268 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 CEACAM1P13688 526 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 CDK11BP21127 795 aaKnown RBP6.42□□□□□ -1.38
NUP98-215ENST00000529063 DNAJA1P31689 397 aaKnown RBP6.42□□□□□ -1.38
NUP98-215ENST00000529063 DDIT3P35638 169 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 P2RY2P41231 377 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 PNPLA4P41247 253 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 PTGER3P43115 390 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 KIR2DL1P43626 348 aaPredicted RBP6.42□□□□□ -1.38
NUP98-215ENST00000529063 SLC6A11P48066 632 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 CACNA2D1P54289 1103 aa6.42□□□□□ -1.38
NUP98-215ENST00000529063 PSMC1P62191 440 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms