RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SNRPFP62306 86 aaKnown RBP9.08□□□□□ -0.96
SSBP3-212ENST00000528930 TFAMQ00059 246 aaKnown RBP9.08□□□□□ -0.96
SSBP3-212ENST00000528930 DPYDQ12882 1025 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 TRIP6Q15654 476 aaKnown RBP9.08□□□□□ -0.96
SSBP3-212ENST00000528930 KNOP1Q1ED39 458 aaKnown RBP9.08□□□□□ -0.96
SSBP3-212ENST00000528930 SLC5A9Q2M3M2 681 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 PABPC1LQ4VXU2 614 aaKnown RBP9.08□□□□□ -0.96
SSBP3-212ENST00000528930 LIN9Q5TKA1 542 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 TPGS2Q68CL5 300 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 TXNDC11Q6PKC3 985 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 GLRX5Q86SX6 157 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 C12orf56Q8IXR9 622 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 C1orf127Q8N9H9 656 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 MCRS1Q96EZ8 462 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 GZF1Q9H116 711 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-212ENST00000528930 AVENQ9NQS1 362 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-212ENST00000528930 INTS13Q9NVM9 706 aa9.08□□□□□ -0.96
SSBP3-212ENST00000528930 DNMT3BQ9UBC3 853 aaKnown RBP9.08□□□□□ -0.96
SSBP3-212ENST00000528930 NCANO14594 1321 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 PTPRJQ12913 1337 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 MYLKQ15746 1914 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 MYBPHLA2RUH7 354 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 CDC14CA4D256 554 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 ZNF233A6NK53 670 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 KPNA7A9QM74 516 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 RNF225M0QZC1 329 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 CYB561D2O14569 222 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 XYLBO75191 536 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 RPN1P04843 607 aaKnown RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 ITGB3P05106 788 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 OR4Q2P0C623 313 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 ODC1P11926 461 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 POLR2BP30876 1174 aaKnown RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 TAF6P49848 677 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 GPR17Q13304 367 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 MYBPC2Q14324 1141 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 SURF1Q15526 300 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 SNRNP35Q16560 246 aaKnown RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 C4orf17Q53FE4 359 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 TAF1BQ53T94 588 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 PPP1R26Q5T8A7 1209 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 LMBRD2Q68DH5 695 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 OVOS1Q6IE37 1185 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 USP37Q86T82 979 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 C11orf74Q86VG3 221 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 TMC8Q8IU68 726 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 HDDC3Q8N4P3 179 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 XXYLT1Q8NBI6 393 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 ENGASEQ8NFI3 743 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 OR5B17Q8NGF7 314 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 NOC3LQ8WTT2 800 aaKnown RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 CACTINQ8WUQ7 758 aaKnown RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 TMEM174Q8WUU8 243 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 DEPDC1BQ8WUY9 529 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 TMEM209Q96SK2 561 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 NUSAP1Q9BXS6 441 aaKnown RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 OXCT2Q9BYC2 517 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 CRISPLD1Q9H336 500 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 KCTD10Q9H3F6 313 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 C8orf33Q9H7E9 229 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 CYP4F11Q9HBI6 524 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 KIAA1586Q9HCI6 787 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 ZFP14Q9HCL3 533 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 EXOC1Q9NV70 894 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 DMAC2Q9NW81 257 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 KIAA1522Q9P206 1035 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 CGNQ9P2M7 1197 aaKnown RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 AFF4Q9UHB7 1163 aaKnown RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 MBD1Q9UIS9 605 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 SIX4Q9UIU6 781 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 MAFFQ9ULX9 164 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 AGAP1Q9UPQ3 857 aa9.07□□□□□ -0.96
SSBP3-212ENST00000528930 APOBEC2Q9Y235 224 aaKnown RBP9.07□□□□□ -0.96
SSBP3-212ENST00000528930 ITPR2Q14571 2701 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 OR6C75A6NL08 312 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 E9PAM4 449 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 DKK1O94907 266 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 RHOBTB3O94955 611 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 CPB1P15086 417 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 CEBPBP17676 345 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 ELF1P32519 619 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 SOX9P48436 509 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 CYP2J2P51589 502 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 CYP24A1Q07973 514 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 NFKBIBQ15653 356 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 SV2CQ496J9 727 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 FAM78AQ5JUQ0 283 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 WSCD1Q658N2 575 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 SLC23A3Q6PIS1 610 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 ZNF574Q6ZN55 896 aaPredicted RBP9.06□□□□□ -0.96
SSBP3-212ENST00000528930 HS2ST1Q7LGA3 356 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 SLCO6A1Q86UG4 719 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 RALGPS2Q86X27 583 aaPredicted RBP9.06□□□□□ -0.96
SSBP3-212ENST00000528930 FMR1NBQ8N0W7 255 aaPredicted RBP9.06□□□□□ -0.96
SSBP3-212ENST00000528930 CSGALNACT2Q8N6G5 542 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 ARMC2Q8NEN0 867 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 OR10T2Q8NGX3 314 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 PLEKHO2Q8TD55 490 aa9.06□□□□□ -0.96
SSBP3-212ENST00000528930 NANOS1Q8WY41 292 aaKnown RBP9.06□□□□□ -0.96
SSBP3-212ENST00000528930 ZNF560Q96MR9 790 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms