RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SRSF5Q13243 272 aaKnown RBP15□□□□□ -0.01
CAPN1-212ENST00000527887 GAB4Q2WGN9 574 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 ZNF658Q5TYW1 1059 aaPredicted RBP15□□□□□ -0.01
CAPN1-212ENST00000527887 NAIF1Q69YI7 327 aaPredicted RBP15□□□□□ -0.01
CAPN1-212ENST00000527887 KLHDC10Q6PID8 442 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 RHBDF2Q6PJF5 856 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 NUDT18Q6ZVK8 323 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 TADA2BQ86TJ2 420 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 ELOA2Q8IYF1 753 aaPredicted RBP15□□□□□ -0.01
CAPN1-212ENST00000527887 ZNF276Q8N554 614 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 C12orf29Q8N999 325 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 NETO1Q8TDF5 533 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 KCNV2Q8TDN2 545 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 USP33Q8TEY7 942 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 EZH1Q92800 747 aaPredicted RBP15□□□□□ -0.01
CAPN1-212ENST00000527887 ZFRQ96KR1 1074 aaKnown RBP15□□□□□ -0.01
CAPN1-212ENST00000527887 TIGD1Q96MW7 591 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 TSG101Q99816 390 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 NACA2Q9H009 215 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 APOBEC3GQ9HC16 384 aaKnown RBP15□□□□□ -0.01
CAPN1-212ENST00000527887 GDPD2Q9HCC8 539 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 CYLDQ9NQC7 956 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 RAB20Q9NX57 234 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 GMIPQ9P107 970 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 OBSL1O75147 1896 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 SLC16A3O15427 465 aaKnown RBP14.99□□□□□ -0.01
CAPN1-212ENST00000527887 TLR5O60602 858 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 BEST1O76090 585 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 APODP05090 189 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 ADH5P11766 374 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 ATP5C1P36542 298 aaKnown RBP14.99□□□□□ -0.01
CAPN1-212ENST00000527887 GRIA2P42262 883 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 TNFRSF4P43489 277 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 PSEN1P49768 467 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 MXI1P50539 228 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 ATXN1P54253 815 aaKnown RBP14.99□□□□□ -0.01
CAPN1-212ENST00000527887 FKBP3Q00688 224 aaKnown RBP14.99□□□□□ -0.01
CAPN1-212ENST00000527887 BTBD8Q5XKL5 378 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 CLEC20AQ6ZU45 233 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 HTR3DQ70Z44 454 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 FBXL13Q8NEE6 735 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 SPATA20Q8TB22 786 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 ELMO3Q96BJ8 720 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 CDK5RAP1Q96SZ6 601 aaKnown RBP14.99□□□□□ -0.01
CAPN1-212ENST00000527887 ANP32EQ9BTT0 268 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 UBXN6Q9BZV1 441 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 CCSER2Q9H7U1 834 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 FAM49BQ9NUQ9 324 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 HMGXB4Q9UGU5 601 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 MMP17Q9ULZ9 603 aa14.99□□□□□ -0.01
CAPN1-212ENST00000527887 PTPRDP23468 1912 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 GREB1Q4ZG55 1949 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 HOXC11O43248 304 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-212ENST00000527887 ALDH1A2O94788 518 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 RHOBTB1O94844 696 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 ADORA2BP29275 332 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 PPP1R2P41236 205 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 PXNP49023 591 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-212ENST00000527887 DGKEP52429 567 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 LRRC63Q05C16 580 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 PRR23CQ6ZRP0 262 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 ZC3H3Q8IXZ2 948 aaKnown RBP14.98□□□□□ -0.01
CAPN1-212ENST00000527887 ENGASEQ8NFI3 743 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 TSTD1Q8NFU3 115 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 WHAMMQ8TF30 809 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 HHIPQ96QV1 700 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 TWNKQ96RR1 684 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 DUSP16Q9BY84 665 aa14.98□□□□□ -0.01
CAPN1-212ENST00000527887 ZNF638Q14966 1978 aaKnown RBP14.98□□□□□ -0.01
CAPN1-212ENST00000527887 HHLA1C9JL84 531 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 EPN2O95208 641 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 KAT7O95251 611 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 ZNF806P0C7X5 589 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 ACO1P21399 889 aaKnown RBP14.97□□□□□ -0.01
CAPN1-212ENST00000527887 PRCPP42785 496 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 KIF11P52732 1056 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 SLC8A3P57103 927 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 ORC1Q13415 861 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 PNOCQ13519 176 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 STIM1Q13586 685 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 ELF2Q15723 593 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 USP39Q53GS9 565 aaKnown RBP14.97□□□□□ -0.01
CAPN1-212ENST00000527887 C2orf27AQ580R0 203 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 LY6G5CQ5SRR4 150 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 TRMT11Q7Z4G4 463 aaKnown RBP14.97□□□□□ -0.01
CAPN1-212ENST00000527887 RASSF3Q86WH2 238 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 DDX1Q92499 740 aaKnown RBP14.97□□□□□ -0.01
CAPN1-212ENST00000527887 TMEM176AQ96HP8 235 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 KLF16Q9BXK1 252 aaPredicted RBP14.97□□□□□ -0.01
CAPN1-212ENST00000527887 MMRN2Q9H8L6 949 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 ARHGEF4Q9NR80 690 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 SPHK2Q9NRA0 654 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 DEC1Q9P2X7 70 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 LSM7Q9UK45 103 aaKnown RBP14.97□□□□□ -0.01
CAPN1-212ENST00000527887 COQ4Q9Y3A0 265 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 USP3Q9Y6I4 520 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 ANAPC1Q9H1A4 1944 aa14.97□□□□□ -0.01
CAPN1-212ENST00000527887 SLC30A4O14863 429 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 CD58P19256 250 aa14.96□□□□□ -0.01
CAPN1-212ENST00000527887 PLA2G4AP47712 749 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms