RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 PIM1P11309 404 aaPredicted RBP12.95□□□□□ -0.34
TSKU-203ENST00000527881 NUDT2P50583 147 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 C21orf59P57076 290 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 PSMC1P62191 440 aaKnown RBP12.95□□□□□ -0.34
TSKU-203ENST00000527881 PSMC5P62195 406 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 PDPK2PQ6A1A2 396 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 POTEAQ6S8J7 498 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 SPOCD1Q6ZMY3 1216 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 FBXL13Q8NEE6 735 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 ACTL9Q8TC94 416 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 MZB1Q8WU39 189 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 NACC1Q96RE7 527 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 AVENQ9NQS1 362 aaPredicted RBP12.95□□□□□ -0.34
TSKU-203ENST00000527881 PLK2Q9NYY3 685 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 PLLPQ9Y342 182 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 SCINQ9Y6U3 715 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 TBX3O15119 743 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 SERPINB7O75635 380 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 DGKIO75912 1065 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 RPL10AP62906 217 aaKnown RBP12.95□□□□□ -0.34
TSKU-203ENST00000527881 NFIL3Q16649 462 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 SMTNL2Q2TAL5 461 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 FAM71DQ8N9W8 422 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 ACTRT2Q8TDY3 377 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 ZNF696Q9H7X3 374 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 TMEM206Q9H813 350 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 ITGB1BP2Q9UKP3 347 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 SSX2IPQ9Y2D8 614 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 TMED5Q9Y3A6 229 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 ARHGEF37A1IGU5 675 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 IDO1P14902 403 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 GDF10P55107 478 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 OTUD4Q01804 1114 aaKnown RBP12.95□□□□□ -0.34
TSKU-203ENST00000527881 AP3B2Q13367 1082 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 VWA5B1Q5TIE3 1220 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 SLC26A11Q86WA9 606 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 SLC44A1Q8WWI5 657 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 SLX1AQ9BQ83 275 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 C20orf27Q9GZN8 174 aa12.95□□□□□ -0.34
TSKU-203ENST00000527881 CYP3A7-CYP3A51PA0A087WV96 503 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 AVILO75366 819 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 TMEM63AO94886 807 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 TOP3BO95985 862 aaKnown RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 ITGAXP20702 1163 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 CYP3A7P24462 503 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 NRLP54845 237 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 CDH15P55291 814 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 PKNOX1P55347 436 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 RPL26P61254 145 aaKnown RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 SMAD1Q15797 465 aaKnown RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 FRMD7Q6ZUT3 714 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 IGDCC3Q8IVU1 814 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 PPP1R36Q96LQ0 422 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 SERPINI1Q99574 410 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 GPATCH1Q9BRR8 931 aaKnown RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 LRP5O75197 1615 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 UBE4BO95155 1302 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 KANSL1LA0AUZ9 987 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 FUOMA2VDF0 154 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 SDR42E2A6NKP2 422 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 KLF11O14901 512 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 KLHL41O60662 606 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 ZBTB11O95625 1053 aaPredicted RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 ADRB2P07550 413 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 CDH3P22223 829 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 RPL22P35268 128 aaKnown RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 CDK9P50750 372 aaKnown RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 RPL7AP62424 266 aaKnown RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 SNRNP35Q16560 246 aaKnown RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 LMBRD2Q68DH5 695 aaPredicted RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 OGFOD2Q6N063 350 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 C16orf46Q6P387 395 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 GPR141Q7Z602 305 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 PIWIL2Q8TC59 973 aaKnown RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 POMGNT1Q8WZA1 660 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 USP13Q92995 863 aaPredicted RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 NRDE2Q9H7Z3 1164 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 THAP1Q9NVV9 213 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 FADS3Q9Y5Q0 445 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 H3BNX3 289 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 MEIS2O14770 477 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 MCF2LO15068 1137 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 SLC16A4O15374 487 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 NDUFB5O43674 189 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 CST8O60676 142 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 HMOX2P30519 316 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 PPARGP37231 505 aaPredicted RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 CDKL1Q00532 357 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 SLC18A2Q05940 514 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 WASHC5Q12768 1159 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 MAMLD1Q13495 774 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 HELQQ8TDG4 1101 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 ZNF512Q96ME7 567 aaPredicted RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 ZMAT2Q96NC0 199 aaKnown RBP12.94□□□□□ -0.34
TSKU-203ENST00000527881 SEMA6AQ9H2E6 1030 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 MAN1C1Q9NR34 630 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 CNTN3Q9P232 1028 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 FETUBQ9UGM5 382 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 VAV3Q9UKW4 847 aa12.94□□□□□ -0.34
TSKU-203ENST00000527881 SNCAIPQ9Y6H5 919 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms