RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 IL17RAQ96F46 866 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 FOXB1Q99853 325 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 SH2D3AQ9BRG2 576 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 MXRA8Q9BRK3 442 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 ZNF577Q9BSK1 485 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 MTG1Q9BT17 334 aaPredicted RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 MENTQ9BUN1 341 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 BOCQ9BWV1 1114 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 KRTAP17-1Q9BYP8 105 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 AGO4Q9HCK5 861 aaKnown RBP5.79□□□□□ -1.48
SVIP-202ENST00000525670 TLR9Q9NR96 1032 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 UBIAD1Q9Y5Z9 338 aa5.79□□□□□ -1.48
SVIP-202ENST00000525670 WDR81Q562E7 1941 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 IGLV3-22A0A075B6J6 115 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 ESYT2A0FGR8 921 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 TMEM150BA6NC51 233 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 PLD2O14939 933 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 MSH4O15457 936 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 ZNF202O95125 648 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 CCNE2O96020 404 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 MMP1P03956 469 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 C1SP09871 688 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 XBP1P17861 261 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 SESN2P58004 480 aaPredicted RBP5.78□□□□□ -1.48
SVIP-202ENST00000525670 ACTR2P61160 394 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 DGCR2P98153 550 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 FHL2Q14192 279 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 UGCGQ16739 394 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 DGKDQ16760 1214 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 KLHDC10Q6PID8 442 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 METTL7BQ6UX53 244 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 DEFB128Q7Z7B8 93 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 HSCBQ8IWL3 235 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 LILRB2Q8N423 598 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 C7orf31Q8N865 590 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 PPTC7Q8NI37 304 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 WASF1Q92558 559 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 RABGGTAQ92696 567 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 KAT2BQ92831 832 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 GLG1Q92896 1179 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 LPPQ93052 612 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 ZNF668Q96K58 619 aaPredicted RBP5.78□□□□□ -1.48
SVIP-202ENST00000525670 PLEKHG4BQ96PX9 1271 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 SDF4Q9BRK5 362 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 ALDH8A1Q9H2A2 487 aaPredicted RBP5.78□□□□□ -1.48
SVIP-202ENST00000525670 AGO3Q9H9G7 860 aaKnown RBP5.78□□□□□ -1.48
SVIP-202ENST00000525670 HDAC6Q9UBN7 1215 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 SLC9A2Q9UBY0 812 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 DDX25Q9UHL0 483 aaKnown RBP5.78□□□□□ -1.48
SVIP-202ENST00000525670 SMC3Q9UQE7 1217 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 NR2E3Q9Y5X4 410 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 SIP14410 1827 aa5.78□□□□□ -1.48
SVIP-202ENST00000525670 KAT6AQ92794 2004 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 CDH23Q9H251 3354 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 MYH9P35579 1960 aaKnown RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 LOC102724159A0A0B4J2E5 919 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 GSTTP1A0A1W2PQM5 241 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 H3BQV1 296 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 IPO5O00410 1097 aaKnown RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 EDIL3O43854 480 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 MARCH6O60337 910 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 GAS7O60861 476 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 H2AFYO75367 372 aaKnown RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 FOSP01100 380 aaPredicted RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 HSP90AA1P07900 732 aaKnown RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 SMIM10L2AP0DMW4 78 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 SMIM10L2BP0DMW5 78 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 MCM7P33993 719 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 FNTBP49356 437 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 MECP2P51608 486 aaKnown RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 ADAM15Q13444 863 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 NEDD9Q14511 834 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 PWP2Q15269 919 aaKnown RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 SAFBQ15424 915 aaKnown RBP eCLIP5.77□□□□□ -1.49
SVIP-202ENST00000525670 ZNF174Q15697 407 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 PTGISQ16647 500 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 LRCH2Q5VUJ6 765 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 NCAPH2Q6IBW4 605 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 NEK8Q86SG6 692 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 DDX53Q86TM3 631 aaKnown RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 CCDC60Q8IWA6 550 aaPredicted RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 D2HGDHQ8N465 521 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 CACTINQ8WUQ7 758 aaKnown RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 LENG9Q96B70 501 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 ZSCAN31Q96LW9 406 aaPredicted RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 PCYT2Q99447 389 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 LBHD1Q9BQE6 289 aaPredicted RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 FAM49AQ9H0Q0 323 aaPredicted RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 GLT8D2Q9H1C3 349 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 UNC45AQ9H3U1 944 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 HIPK3Q9H422 1215 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 ZNF703Q9H7S9 590 aaPredicted RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 SH3GLB2Q9NR46 395 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 SETD4Q9NVD3 440 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 MAP3K20Q9NYL2 800 aaKnown RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 SAE1Q9UBE0 346 aaPredicted RBP5.77□□□□□ -1.49
SVIP-202ENST00000525670 GIT1Q9Y2X7 761 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 GBF1Q92538 1859 aa5.77□□□□□ -1.49
SVIP-202ENST00000525670 ELP1O95163 1332 aa5.76□□□□□ -1.49
SVIP-202ENST00000525670 ARID2Q68CP9 1835 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms