RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 DUSP2Q05923 314 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 SF3A3Q12874 501 aaKnown RBP eCLIP5.88□□□□□ -1.47
USP47-204ENST00000525078 EIF2B5Q13144 721 aaKnown RBP5.88□□□□□ -1.47
USP47-204ENST00000525078 SP140Q13342 867 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 MED22Q15528 200 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 TCP11X2Q5H9J9 407 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 CRB2Q5IJ48 1285 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 ZNF569Q5MCW4 686 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 AFMIDQ63HM1 303 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 KCTD20Q7Z5Y7 419 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 PROSER1Q86XN7 944 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 PDSS2Q86YH6 399 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 SPPL2CQ8IUH8 684 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 FAM71DQ8N9W8 422 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 POMGNT2Q8NAT1 580 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 NETO1Q8TDF5 533 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 VPS33AQ96AX1 596 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 MEGF10Q96KG7 1140 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 MOGAT1Q96PD6 335 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 NACC1Q96RE7 527 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 MYOCQ99972 504 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 INTS2Q9H0H0 1204 aaKnown RBP5.88□□□□□ -1.47
USP47-204ENST00000525078 SIK2Q9H0K1 926 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 TSPY26PQ9H489 355 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 PLEKHA2Q9HB19 425 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 BARX1Q9HBU1 254 aaPredicted RBP5.88□□□□□ -1.47
USP47-204ENST00000525078 XPNPEP3Q9NQH7 507 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 PCDHB16Q9NRJ7 776 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 LIN7CQ9NUP9 197 aaKnown RBP5.88□□□□□ -1.47
USP47-204ENST00000525078 HSPBP1Q9NZL4 362 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 JKAMPQ9P055 326 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 EPS15L1Q9UBC2 864 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 HDAC5Q9UQL6 1122 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 NPIPB15A6NHN6 443 aaPredicted RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 FAM90A20PA6NIJ5 464 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 MYO1GB0I1T2 1018 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 ADAM20O43506 726 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 TBX10O75333 385 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 CYBBP04839 570 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 ITGB7P26010 798 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 BSGP35613 385 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 ZNF41P51814 821 aaPredicted RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 WNT3P56703 355 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 SATB1Q01826 763 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 KRT17Q04695 432 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 TBL3Q12788 808 aaKnown RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 PTP4A2Q12974 167 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 CSHL1Q14406 222 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 PRICKLE4Q2TBC4 344 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 P3H1Q32P28 736 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 PLEKHS1Q5SXH7 462 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 PHF19Q5T6S3 580 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 FAM160B1Q5W0V3 765 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 ALKBH5Q6P6C2 394 aaKnown RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 DCLRE1AQ6PJP8 1040 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 PAQR3Q6TCH7 311 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 ETV3LQ6ZN32 361 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 FAM83HQ6ZRV2 1179 aaPredicted RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 ZNF365Q70YC5 407 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 CXXC5Q7LFL8 322 aaKnown RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 RHOT2Q8IXI1 618 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 CCDC105Q8IYK2 499 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 SCML4Q8N228 414 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 LILRA3Q8N6C8 439 aaPredicted RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 Q8NFD4 153 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 NLGN4YQ8NFZ3 816 aaPredicted RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 MOSPD2Q8NHP6 518 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 PIGOQ8TEQ8 1089 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 ABHD5Q8WTS1 349 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 NCSTNQ92542 709 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 SPATA5L1Q9BVQ7 753 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 OSBPL1AQ9BXW6 950 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 TAOK3Q9H2K8 898 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 STN1Q9H668 368 aaKnown RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 C7orf69Q9H7B7 122 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 CARS2Q9HA77 564 aaKnown RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 GPR35Q9HC97 309 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 DLL4Q9NR61 685 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 ARHGEF3Q9NR81 526 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 TMLHEQ9NVH6 421 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 PPP1R14DQ9NXH3 145 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 ING3Q9NXR8 418 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 NOP53Q9NZM5 478 aaKnown RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 CPSF2Q9P2I0 782 aaKnown RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 LIMA1Q9UHB6 759 aaKnown RBP5.87□□□□□ -1.47
USP47-204ENST00000525078 NFU1Q9UMS0 254 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 SLC45A2Q9UMX9 530 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 AGTPBP1Q9UPW5 1226 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 GDAQ9Y2T3 454 aa5.87□□□□□ -1.47
USP47-204ENST00000525078 A0A0G2JNJ9 132 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 TTC36A6NLP5 189 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 TMEM232C9JQI7 657 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 MPHOSPH10O00566 681 aaKnown RBP5.86□□□□□ -1.47
USP47-204ENST00000525078 MUSKO15146 869 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 SRGAP3O43295 1099 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 TAF5LO75529 589 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 LARGE1O95461 756 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 CER1O95813 267 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 F13BP05160 661 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ARP10275 920 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms