RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 SYKP43405 635 aa13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 VAMP7P51809 220 aa13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 SF3A2Q15428 464 aaKnown RBP13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 AASDHQ4L235 1098 aaPredicted RBP13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 PPM1JQ5JR12 505 aa13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 LY6G5CQ5SRR4 150 aa13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 C12orf50Q8NA57 414 aaPredicted RBP13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 TTC16Q8NEE8 873 aa13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 SLC2A14Q8TDB8 520 aa13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 KLF16Q9BXK1 252 aaPredicted RBP13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 UBXN6Q9BZV1 441 aa13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 SCAND2PQ9GZW5 306 aaPredicted RBP13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 CCSER2Q9H7U1 834 aa13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 TLR8Q9NR97 1041 aaKnown RBP13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 SCML2Q9UQR0 700 aa13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 STARD13Q9Y3M8 1113 aa13.38□□□□□ -0.27
TOP1MT-217ENST00000523417 SDK1Q7Z5N4 2213 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 DCLK1O15075 740 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 ALDH1A2O94788 518 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 TRIM21P19474 475 aaKnown RBP13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 PSMC2P35998 433 aaKnown RBP13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 NDUFA8P51970 172 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 MESP2Q0VG99 397 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 EOGTQ5NDL2 527 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 STPG1Q5TH74 334 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 PMS2CLQ68D20 193 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 IL31Q6EBC2 164 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 TMEM92Q6UXU6 159 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 KRBA2Q6ZNG9 492 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 NUDT18Q6ZVK8 323 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 C12orf40Q86WS4 652 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 TTC39CQ8N584 583 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 C12orf29Q8N999 325 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 WHAMMQ8TF30 809 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 CCDC47Q96A33 483 aaKnown RBP13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 LSM14BQ9BX40 385 aaKnown RBP13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 NT5C1AQ9BXI3 368 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 APOBEC3GQ9HC16 384 aaKnown RBP13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 ARHGEF4Q9NR80 690 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 SPHK2Q9NRA0 654 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 KRT82Q9NSB4 513 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 RXFP3Q9NSD7 469 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 GMIPQ9P107 970 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 SH3BP1Q9Y3L3 701 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 PCDHA5Q9Y5H7 936 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 ATP6V1DQ9Y5K8 247 aa13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 TPRP12270 2363 aaKnown RBP13.37□□□□□ -0.27
TOP1MT-217ENST00000523417 ANTXRLA6NF34 631 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 TLR5O60602 858 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 CILPO75339 1184 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 CAVIN2O95810 425 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 FAM200BP0CF97 657 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 HNRNPLP14866 589 aaKnown RBP eCLIP13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 NR2F2P24468 414 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 ATP5C1P36542 298 aaKnown RBP13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 P2RY2P41231 377 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 PGFP49763 221 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 PSEN1P49768 467 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 MAP3K7CLP57077 242 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 PPP3CAQ08209 521 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 ADAM9Q13443 819 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 BYSLQ13895 437 aaKnown RBP13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 EDRF1Q3B7T1 1238 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 ZCWPW2Q504Y3 356 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 EMC10Q5UCC4 262 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 CEP135Q66GS9 1140 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 CLEC20AQ6ZU45 233 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 TMEM25Q86YD3 366 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 TXNDC5Q8NBS9 432 aaKnown RBP13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 MDGA1Q8NFP4 955 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 CYFIP2Q96F07 1278 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 DNAI2Q9GZS0 605 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 POLMQ9NP87 494 aaPredicted RBP13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 MARK1Q9P0L2 795 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 DEC1Q9P2X7 70 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 USP3Q9Y6I4 520 aa13.36□□□□□ -0.27
TOP1MT-217ENST00000523417 SGK1O00141 431 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 ADAM23O75077 832 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 TULP3O75386 442 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 ZNF202O95125 648 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 KLF8O95600 359 aaPredicted RBP13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 CCDC130P13994 396 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 PLA2G4AP47712 749 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 KIF11P52732 1056 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 SEC13P55735 322 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 IFRD2Q12894 506 aaPredicted RBP13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 COBLL1Q53SF7 1204 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 BTBD8Q5XKL5 378 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 KRT39Q6A163 491 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 SPOPLQ6IQ16 392 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 SCARA5Q6ZMJ2 495 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 TRMT11Q7Z4G4 463 aaKnown RBP13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 BBS7Q8IWZ6 715 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 CCDC33Q8N5R6 958 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 ALLCQ8N6M5 410 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 SPRYD3Q8NCJ5 442 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 TAS1R2Q8TE23 839 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 WBP2Q969T9 261 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 ELMO3Q96BJ8 720 aa13.35□□□□□ -0.27
TOP1MT-217ENST00000523417 CNTNAP3BQ96NU0 1288 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms