RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 DDX54Q8TDD1 881 aaKnown RBP8.59□□□□□ -1.03
HMGB4-204ENST00000522796 MCUR1Q96AQ8 359 aa8.59□□□□□ -1.03
HMGB4-204ENST00000522796 RANBP9Q96S59 729 aa8.59□□□□□ -1.03
HMGB4-204ENST00000522796 SLC29A1Q99808 456 aa8.59□□□□□ -1.03
HMGB4-204ENST00000522796 TARS2Q9BW92 718 aaKnown RBP8.59□□□□□ -1.03
HMGB4-204ENST00000522796 TLR10Q9BXR5 811 aa8.59□□□□□ -1.03
HMGB4-204ENST00000522796 NEUROG2Q9H2A3 272 aa8.59□□□□□ -1.03
HMGB4-204ENST00000522796 DTLQ9NZJ0 730 aa8.59□□□□□ -1.03
HMGB4-204ENST00000522796 LIMA1Q9UHB6 759 aaKnown RBP8.59□□□□□ -1.03
HMGB4-204ENST00000522796 ENOPH1Q9UHY7 261 aa8.59□□□□□ -1.03
HMGB4-204ENST00000522796 CPSF3Q9UKF6 684 aaKnown RBP8.59□□□□□ -1.03
HMGB4-204ENST00000522796 ERVK-19Q9WJR5 959 aa8.59□□□□□ -1.03
HMGB4-204ENST00000522796 INO80Q9ULG1 1556 aaPredicted RBP8.59□□□□□ -1.03
HMGB4-204ENST00000522796 EMSYQ7Z589 1322 aa8.59□□□□□ -1.03
HMGB4-204ENST00000522796 KDM3AQ9Y4C1 1321 aa8.59□□□□□ -1.03
HMGB4-204ENST00000522796 CFAP99D6REC4 459 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 SLC7A4O43246 635 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 PEX1O43933 1283 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 SSX5O60225 188 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 NUAK1O60285 661 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 PDE8AO60658 829 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 SURF6O75683 361 aaKnown RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 USP1O94782 785 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 APEHP13798 732 aaKnown RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 CDC25AP30304 524 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 BTDP43251 543 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 GDI2P50395 445 aaKnown RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 CAP1Q01518 475 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 SNTA1Q13424 505 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 ACAP2Q15057 778 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 USPL1Q5W0Q7 1092 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 TPGS2Q68CL5 300 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 TMEM132EQ6IEE7 984 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 HHIPL2Q6UWX4 724 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 DPP9Q86TI2 863 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 STX12Q86Y82 276 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 TCAIMQ8N3R3 496 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 AFAP1L2Q8N4X5 818 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 Q8N9G6 341 aaPredicted RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 ACTRT1Q8TDG2 376 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 MAP4K1Q92918 833 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 ZUFSPQ96AP4 578 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 MAGEB18Q96M61 343 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 TGS1Q96RS0 853 aaKnown RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 GAS2L1Q99501 681 aaPredicted RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 CINPQ9BW66 212 aaPredicted RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 OR2B2Q9GZK3 357 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 Q9H521 79 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 AZI2Q9H6S1 392 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 PPARGC1AQ9UBK2 798 aaKnown RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 TMEM59LQ9UK28 342 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 CPDO75976 1380 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 MLH3Q9UHC1 1453 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 SALL1Q9NSC2 1324 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 PTPDC1A2A3K4 754 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 A8MU76 341 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 LINC01387J3KSC0 135 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 PPP6R2O75170 966 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 FKBP6O75344 327 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 CD4P01730 458 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 ACAT1P24752 427 aaKnown RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 PRDX6P30041 224 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 RRM2P31350 389 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 IFI35P80217 286 aaPredicted RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 SPAG1Q07617 926 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 FUT2Q10981 343 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 TWISTNBQ3B726 338 aaPredicted RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 SFT2D3Q587I9 215 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 C12orf60Q5U649 245 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 EPM2AIP1Q7L775 607 aaPredicted RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 CCDC36Q8IYA8 594 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 DEPDC4Q8N2C3 294 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 FAM109AQ8N4B1 249 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 ASCC1Q8N9N2 400 aaKnown RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 ZNF579Q8NAF0 562 aaKnown RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 ZBTB38Q8NAP3 1195 aaPredicted RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 CIDECQ96AQ7 238 aaPredicted RBP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 WNK4Q96J92 1243 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 MS4A14Q96JA4 679 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 JPH4Q96JJ6 628 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 PSMB7Q99436 277 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 HERPUD2Q9BSE4 406 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 NT5C3AQ9H0P0 336 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 SLC35C2Q9NQQ7 365 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.58□□□□□ -1.04
HMGB4-204ENST00000522796 GIMAP4Q9NUV9 329 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 KBTBD4Q9NVX7 518 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 HMG20BQ9P0W2 317 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 CAPN11Q9UMQ6 739 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 ATP7AQ04656 1500 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 PITPNM2Q9BZ72 1349 aa8.58□□□□□ -1.04
HMGB4-204ENST00000522796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMGB4-204ENST00000522796 PDPK1O15530 556 aa8.57□□□□□ -1.04
HMGB4-204ENST00000522796 UGT1A9O60656 530 aa8.57□□□□□ -1.04
HMGB4-204ENST00000522796 CAPNS1P04632 268 aa8.57□□□□□ -1.04
HMGB4-204ENST00000522796 URODP06132 367 aa8.57□□□□□ -1.04
HMGB4-204ENST00000522796 DBTP11182 482 aaKnown RBP8.57□□□□□ -1.04
HMGB4-204ENST00000522796 CCDC130P13994 396 aa8.57□□□□□ -1.04
HMGB4-204ENST00000522796 ATP6V1B1P15313 513 aa8.57□□□□□ -1.04
HMGB4-204ENST00000522796 ZNF23P17027 643 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms