RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TBC1D1Q86TI0 1168 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 DTX2Q86UW9 622 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 NRSN1Q8IZ57 195 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 ESX1Q8N693 406 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 HTRA1Q92743 480 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 LTV1Q96GA3 475 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 WDYHV1Q96HA8 205 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 MECRQ9BV79 373 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 GPR87Q9BY21 358 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 KLC2Q9H0B6 622 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 UNKLQ9H9P5 680 aaKnown RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 ALG13Q9NP73 1137 aaKnown RBP3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 ZSCAN32Q9NX65 697 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 SORCS3Q9UPU3 1222 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 SLC27A6Q9Y2P4 619 aa3.98□□□□□ -1.77
HMGN1P28-201ENST00000521340 NPEPPSL1A6NEC2 478 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 PRSS47A8MTI9 375 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 GOLGA6L6A8MZA4 724 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 MUSKO15146 869 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 ZNF623O75123 536 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 ERN1O75460 977 aaKnown RBP3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 RPS6KA4O75676 772 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 CER1O95813 267 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 ACO1P21399 889 aaKnown RBP3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 COMTP21964 271 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 NPTX2P47972 431 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 ALDH18A1P54886 795 aaKnown RBP3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 EIF5P55010 431 aaKnown RBP3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 ACTR2P61160 394 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 SLC25A3Q00325 362 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 LMOD3Q0VAK6 560 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 GPS1Q13098 491 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 DCTN1Q14203 1278 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 CLCA4Q14CN2 919 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 GEN1Q17RS7 908 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 BEAN1Q3B7T3 259 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 GALNTL6Q49A17 601 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 AASDHQ4L235 1098 aaPredicted RBP3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 CERCAMQ5T4B2 595 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 RASGRP2Q7LDG7 609 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 GSPT2Q8IYD1 628 aaKnown RBP3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 ATG4AQ8WYN0 398 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 ZNF668Q96K58 619 aaPredicted RBP3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 C17orf80Q9BSJ5 609 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 KRTAP3-1Q9BYR8 98 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 KCNK9Q9NPC2 374 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 SWAP70Q9UH65 585 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 SERTAD3Q9UJW9 196 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 SLC13A4Q9UKG4 626 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 C19orf53Q9UNZ5 99 aaPredicted RBP3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 FPGT-TNNI3KV9GXZ4 949 aa3.97□□□□□ -1.77
HMGN1P28-201ENST00000521340 PNMA6EA0A0J9YXQ4 647 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 WDR27A2RRH5 827 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 HMX3A6NHT5 357 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 A6NLC8 198 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 CAPN14A8MX76 684 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 VWC2LB2RUY7 222 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 CTIFO43310 598 aaKnown RBP3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 SNX2O60749 519 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 VNN1O95497 513 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 PDHA1P08559 390 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 SRGAP2BP0DMP2 458 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 ITGALP20701 1170 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 MAN1A1P33908 653 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 PBX1P40424 430 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 PGDP52209 483 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 VAV2P52735 878 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 FAM3BP58499 235 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 VAMP2P63027 116 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 TUBB3Q13509 450 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 E2F2Q14209 437 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 KCNJ12Q14500 433 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 RABL3Q5HYI8 236 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 SLC9C2Q5TAH2 1124 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 ICE2Q659A1 982 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 SLC9A4Q6AI14 798 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 SFRP4Q6FHJ7 346 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 GRHL2Q6ISB3 625 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 RRAGAQ7L523 313 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 MAVSQ7Z434 540 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 TRABD2AQ86V40 505 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 SGMS1Q86VZ5 419 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 HEATR4Q86WZ0 1026 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 CIR1Q86X95 450 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 CCDC117Q8IWD4 279 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 SLC15A3Q8IY34 581 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 IZUMO1Q8IYV9 350 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 LRRC71Q8N4P6 559 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 PCYOX1LQ8NBM8 494 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 ADAMTS18Q8TE60 1221 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 ABHD5Q8WTS1 349 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 COG8Q96MW5 612 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 TRAPPC9Q96Q05 1148 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 HIST1H2AAQ96QV6 131 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 VN1R3Q9BXE9 311 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 ARHGAP39Q9C0H5 1083 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 PRDM13Q9H4Q3 707 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 TAF1DQ9H5J8 278 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 CEP72Q9P209 647 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 PI4KBQ9UBF8 816 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 492.6 ms