RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 C10orf88Q9H8K7 445 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 GPATCH2LQ9NWQ4 482 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.79□□□□□ -1
HMGB4-203ENST00000519684 LGALS13Q9UHV8 139 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 CFAP69A5D8W1 941 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 ZNF487B1APH4 448 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 GOLGA8MH3BSY2 632 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 KIAA0754O94854 1291 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 ALDH1A1P00352 501 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 ZFXP17010 805 aaPredicted RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 PTPN1P18031 435 aaKnown RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 PHBP35232 272 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 RPL34P49207 117 aaKnown RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 BASP1P80723 227 aaKnown RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 NR1H3Q13133 447 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 ZC3H12AQ5D1E8 599 aaKnown RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 PPP6R3Q5H9R7 873 aaPredicted RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 DSTYKQ6XUX3 929 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 CPLX4Q7Z7G2 160 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 SERINC5Q86VE9 423 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 EXOC3L1Q86VI1 746 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 OSTM1Q86WC4 334 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 CCDC13Q8IYE1 715 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 CLEC4CQ8WTT0 213 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 DYDC1Q8WWB3 177 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 KHSRPQ92945 711 aaKnown RBP eCLIP8.79□□□□□ -1
HMGB4-203ENST00000519684 DUSP16Q9BY84 665 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 SENP6Q9GZR1 1112 aaPredicted RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 TSPYL2Q9H2G4 693 aaPredicted RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 PPCSQ9HAB8 311 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 XPNPEP3Q9NQH7 507 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 GABRQQ9UN88 632 aa8.79□□□□□ -1
HMGB4-203ENST00000519684 FARP1Q9Y4F1 1045 aaPredicted RBP8.79□□□□□ -1
HMGB4-203ENST00000519684 SCN10AQ9Y5Y9 1956 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 ALOX15BO15296 676 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 GABBR2O75899 941 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 ZBED1O96006 694 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 NPR3P17342 541 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 FLT3LGP49771 235 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 SULT1E1P49888 294 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 HDAC4P56524 1084 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 RNASELQ05823 741 aaKnown RBP8.78□□□□□ -1
HMGB4-203ENST00000519684 ADIGQ0VDE8 80 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 TMED2Q15363 201 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 MDH1BQ5I0G3 518 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 WSCD1Q658N2 575 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 PPP1R21Q6ZMI0 780 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 CDKL3Q8IVW4 592 aaPredicted RBP8.78□□□□□ -1
HMGB4-203ENST00000519684 SIX6OS1Q8N1H7 587 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 TMEM86AQ8N2M4 240 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 TAB3Q8N5C8 712 aaPredicted RBP8.78□□□□□ -1
HMGB4-203ENST00000519684 PLD5Q8N7P1 536 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 ATP11CQ8NB49 1132 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 PYROXD1Q8WU10 500 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 CPT1BQ92523 772 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 FAM149B1Q96BN6 582 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 CHMP6Q96FZ7 201 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 SENP8Q96LD8 212 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 GAD1Q99259 594 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 ARHGAP39Q9C0H5 1083 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 DHX35Q9H5Z1 703 aaKnown RBP8.78□□□□□ -1
HMGB4-203ENST00000519684 LRRC4Q9HBW1 653 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 KCNK9Q9NPC2 374 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 PAK5Q9P286 719 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 CTNNAL1Q9UBT7 734 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 TBK1Q9UHD2 729 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 XPO7Q9UIA9 1087 aaKnown RBP8.78□□□□□ -1
HMGB4-203ENST00000519684 AP4E1Q9UPM8 1137 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 GIT1Q9Y2X7 761 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 HEY1Q9Y5J3 304 aa8.78□□□□□ -1
HMGB4-203ENST00000519684 KCNN4O15554 427 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 ATP2C2O75185 946 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 DAB1O75553 588 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 CHRNA1P02708 482 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 FAM200BP0CF97 657 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 ATP2A2P16615 1042 aaKnown RBP8.77□□□□□ -1
HMGB4-203ENST00000519684 ACAT1P24752 427 aaKnown RBP8.77□□□□□ -1
HMGB4-203ENST00000519684 CYP2F1P24903 491 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 TKTP29401 623 aaKnown RBP8.77□□□□□ -1
HMGB4-203ENST00000519684 THPOP40225 353 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 LHX1P48742 406 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 RAB27AP51159 221 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 HP1BP3Q5SSJ5 553 aaPredicted RBP8.77□□□□□ -1
HMGB4-203ENST00000519684 SLC9A4Q6AI14 798 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 STRADAQ7RTN6 431 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 PIGZQ86VD9 579 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 PDIK1LQ8N165 341 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 NAT8LQ8N9F0 302 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 ATXN2LQ8WWM7 1075 aaKnown RBP8.77□□□□□ -1
HMGB4-203ENST00000519684 CENPIQ92674 756 aaPredicted RBP8.77□□□□□ -1
HMGB4-203ENST00000519684 NSRP1Q9H0G5 558 aaKnown RBP8.77□□□□□ -1
HMGB4-203ENST00000519684 DDX43Q9NXZ2 648 aaKnown RBP8.77□□□□□ -1
HMGB4-203ENST00000519684 NAALADL1Q9UQQ1 740 aa8.77□□□□□ -1
HMGB4-203ENST00000519684 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.77□□□□□ -1.01
HMGB4-203ENST00000519684 ARL5CA6NH57 179 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 POC1B-GALNT4F8VUJ3 575 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 TOMM70O94826 608 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 BRAFP15056 766 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 RPL9P32969 192 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms