RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLN8-204ENST00000519254 RNF25Q96BH1 459 aaPredicted RBP15.17■□□□□ 0.02
CLN8-204ENST00000519254 PGLYRP2Q96PD5 576 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 SLITRK1Q96PX8 696 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 PKMYT1Q99640 499 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 ERP44Q9BS26 406 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 HEMGNQ9BXL5 484 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 OSBPL8Q9BZF1 889 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 MIS12Q9H081 205 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 ZCWPW1Q9H0M4 648 aa15.17■□□□□ 0.02
CLN8-204ENST00000519254 H7C4K7 107 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 BEST1O76090 585 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 FGF18O76093 207 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 CSPG5O95196 566 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 SOD2P04179 222 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 LINC00271P0C7V0 271 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 RPL17P18621 184 aaKnown RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 BDNFP23560 247 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 DNAJB2P25686 324 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 CA8P35219 290 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 CTNNB1P35222 781 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 KCNJ1P48048 391 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 FNTAP49354 379 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 MAP3K7CLP57077 242 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 SLC8A3P57103 927 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 PLCB3Q01970 1234 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 MRPL58Q14197 206 aaKnown RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 MAPRE1Q15691 268 aaKnown RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 OLFML1Q6UWY5 402 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 MFSD7Q6UXD7 560 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 SPATA2LQ8IUW3 424 aaPredicted RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 DCP1BQ8IZD4 617 aaKnown RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 TSEN2Q8NCE0 465 aaKnown RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 RAPGEF5Q92565 580 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 KHSRPQ92945 711 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLN8-204ENST00000519254 DUSP16Q9BY84 665 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 DCLK3Q9C098 648 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 RAB17Q9H0T7 212 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 NEUROG2Q9H2A3 272 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 DPH5Q9H2P9 285 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 CHST7Q9NS84 486 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 ABI2Q9NYB9 513 aaPredicted RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 R3HDM2Q9Y2K5 976 aaKnown RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 CARNS1A5YM72 827 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 OR6C75A6NL08 312 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 C2CD4BA6NLJ0 364 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 H3BQF6 201 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 PAPSS1O43252 624 aaPredicted RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 EFEMP2O95967 443 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 KRT1P04264 644 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 NPR3P17342 541 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 IL1R2P27930 398 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 RPL34P49207 117 aaKnown RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 GLUD2P49448 558 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 ZNF143P52747 638 aaPredicted RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 CACNA2D1P54289 1103 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 KRT17Q04695 432 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 HLTFQ14527 1009 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLN8-204ENST00000519254 ACAP1Q15027 740 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 PSMD5Q16401 504 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 RSPO2Q6UXX9 243 aaPredicted RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 CLEC20AQ6ZU45 233 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 POLNQ7Z5Q5 900 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 DDX53Q86TM3 631 aaKnown RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 SCUBE3Q8IX30 993 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 RNF168Q8IYW5 571 aaPredicted RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 VPS52Q8N1B4 723 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 KLHL23Q8NBE8 558 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 AUTS2Q8WXX7 1259 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 CLP1Q92989 425 aaKnown RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 ZBTB9Q96C00 473 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 ACSF2Q96CM8 615 aaPredicted RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 SMARCD1Q96GM5 515 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 RBM41Q96IZ5 413 aaKnown RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 RUNDC3BQ96NL0 473 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 HERC2P3Q9BVR0 1158 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 TRIM31Q9BZY9 425 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 FAM114A2Q9NRY5 505 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 DDX56Q9NY93 547 aaKnown RBP15.16■□□□□ 0.02
CLN8-204ENST00000519254 CDY1Q9Y6F8 540 aa15.16■□□□□ 0.02
CLN8-204ENST00000519254 LINC01553A4QN01 128 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 C3orf70A6NLC5 250 aaPredicted RBP15.15■□□□□ 0.02
CLN8-204ENST00000519254 H0YGN5 161 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 FLT3P36888 993 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 DRG2P55039 364 aaKnown RBP15.15■□□□□ 0.02
CLN8-204ENST00000519254 SLC6A3Q01959 620 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 ADCY2Q08462 1091 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 TAF5Q15542 800 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 SPOCD1Q6ZMY3 1216 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 C4orf50Q6ZRC1 276 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 SPRED2Q7Z698 418 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 CCDC105Q8IYK2 499 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 RXFP2Q8WXD0 754 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 ATG4AQ8WYN0 398 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 SLCO2A1Q92959 643 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 KCNK16Q96T55 309 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 SMOQ99835 787 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 TMEM30AQ9NV96 361 aa15.15■□□□□ 0.02
CLN8-204ENST00000519254 XPO1O14980 1071 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms