RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 NAT16Q8N8M0 369 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 PNPLA1Q8N8W4 532 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 OR5B17Q8NGF7 314 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 IPO4Q8TEX9 1081 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 FOXJ1Q92949 421 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 DNAJC19Q96DA6 116 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 KIF2CQ99661 725 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 GABRG3Q99928 467 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 SPHK2Q9NRA0 654 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 TMEM30AQ9NV96 361 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 KIAA1522Q9P206 1035 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 STK17AQ9UEE5 414 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 CYP8B1Q9UNU6 501 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 NFE2L3Q9Y4A8 694 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 ADAMTS9Q9P2N4 1935 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 H3BQV1 296 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 KIAA0391O15091 583 aaKnown RBP13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 TACC1O75410 805 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 RTN3O95197 1032 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 TNNC2P02585 160 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 GNSP15586 552 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 YWHAQP27348 245 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 GNL1P36915 607 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 TUBP50607 506 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 CASP5P51878 434 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 CACNA2D1P54289 1103 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 GRIK2Q13002 908 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 DUOXA2Q1HG44 320 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 WDR45BQ5MNZ6 344 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 EGFLAMQ63HQ2 1017 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 TOGARAM2Q6ZUX3 1019 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 TMEM25Q86YD3 366 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 BBS7Q8IWZ6 715 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 RGL4Q8IZJ4 473 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 SYCP3Q8IZU3 236 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 NUP93Q8N1F7 819 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 MDM1Q8TC05 714 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 MMS19Q96T76 1030 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 TBC1D7Q9P0N9 293 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 PCOLCE2Q9UKZ9 415 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 SH3BP1Q9Y3L3 701 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 NME7Q9Y5B8 376 aa13.12□□□□□ -0.31
TRAPPC9-204ENST00000518723 KALRNO60229 2985 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 TRIM24O15164 1050 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 PTPN1P18031 435 aaKnown RBP13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 WASP42768 502 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 SURF1Q15526 300 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 ANO4Q32M45 955 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 HECTD3Q5T447 861 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 GRAMD4Q6IC98 578 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 SDE2Q6IQ49 451 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 HS2ST1Q7LGA3 356 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 SLCO6A1Q86UG4 719 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 CHPFQ8IZ52 775 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 DNASE2BQ8WZ79 361 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 FBXO32Q969P5 355 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 MRGPRX1Q96LB2 322 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 BBC3Q96PG8 261 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 ACOX2Q99424 681 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 MRPL45Q9BRJ2 306 aaKnown RBP13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 ZNF518BQ9C0D4 1074 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 SNX25Q9H3E2 840 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 PCIF1Q9H4Z3 704 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 IL37Q9NZH6 218 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 RAXQ9Y2V3 346 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 MYOFQ9NZM1 2061 aa13.11□□□□□ -0.31
TRAPPC9-204ENST00000518723 FAM92AA1XBS5 289 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 FRMD3A2A2Y4 597 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 ZNF233A6NK53 670 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 GFRA2O00451 464 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 CACNG3O60359 315 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 NDUFS2O75306 463 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 DKK1O94907 266 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 ZNF883P0CG24 379 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 TMPRSS7Q7RTY8 843 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 METTL3Q86U44 580 aaKnown RBP13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 WDR49Q8IV35 697 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 HNRNPLLQ8WVV9 542 aaKnown RBP13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 COL26A1Q96A83 441 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 EPSTI1Q96J88 318 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 B3GNT5Q9BYG0 378 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 FGFBP2Q9BYJ0 223 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 DNAJC17Q9NVM6 304 aaKnown RBP13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 BPTFQ12830 3046 aa13.1□□□□□ -0.31
TRAPPC9-204ENST00000518723 PLXNB3Q9ULL4 1909 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 ASXL3Q9C0F0 2248 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 URB1O60287 2271 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 A0A1B0GTW7 788 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 ZDHHC11BP0C7U3 371 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 CD6P30203 668 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 IFRD2Q12894 506 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 SF3A1Q15459 793 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 USP49Q70CQ1 688 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 HTR3DQ70Z44 454 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 SV2BQ7L1I2 683 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 TRAPPC11Q7Z392 1133 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 BRAPQ7Z569 592 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 CBWD2Q8IUF1 395 aa13.09□□□□□ -0.31
TRAPPC9-204ENST00000518723 B3GALNT2Q8NCR0 500 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms