RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PMPCBO75439 489 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 MST1P26927 711 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 RBL1P28749 1068 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 IL6STP40189 918 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-207ENST00000518569 PDE1AP54750 535 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 COL10A1Q03692 680 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 CYP1B1Q16678 543 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 RAP1GAP2Q684P5 730 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 PGBD2Q6P3X8 592 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 FBXO38Q6PIJ6 1188 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 C1orf228Q6PIY5 440 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 USP49Q70CQ1 688 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 MYLK4Q86YV6 388 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-207ENST00000518569 LRRC71Q8N4P6 559 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 SIRT6Q8N6T7 355 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 ENAHQ8N8S7 591 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-207ENST00000518569 GPR150Q8NGU9 434 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 TBC1D5Q92609 795 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 CTHRC1Q96CG8 243 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 UROC1Q96N76 676 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 HAPLN3Q96S86 360 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 FSD1LQ9BXM9 530 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 PCDHAC1Q9H158 963 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 IKZF4Q9H2S9 585 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 SYNPO2LQ9H987 977 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 AS3MTQ9HBK9 375 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 STEAP1Q9UHE8 339 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 TLK1Q9UKI8 766 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 SLC39A10Q9ULF5 831 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 RIMKLBQ9ULI2 386 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 INSL6Q9Y581 213 aa4.36□□□□□ -1.71
VPS13B-207ENST00000518569 A0A087WV62 115 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 H0YIZ8 118 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 AGPSO00116 658 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 QSOX1O00391 747 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 EXOC5O00471 708 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 KIAA0355O15063 1070 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 FFAR2O15552 330 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 GLP2RO95838 553 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 LDHAP00338 332 aaKnown RBP4.35□□□□□ -1.71
VPS13B-207ENST00000518569 NPSP0C0P6 89 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 ARP10275 920 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 MYCLP12524 364 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-207ENST00000518569 DRD4P21917 467 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 ITPKBP27987 946 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 CTGFP29279 349 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 CYP2C18P33260 490 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 HTR7P34969 479 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 PLA2G5P39877 138 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 CCT8P50990 548 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 EEFSECP57772 596 aaKnown RBP4.35□□□□□ -1.71
VPS13B-207ENST00000518569 SUMO2P61956 95 aaKnown RBP4.35□□□□□ -1.71
VPS13B-207ENST00000518569 NSUN2Q08J23 767 aaKnown RBP eCLIP4.35□□□□□ -1.71
VPS13B-207ENST00000518569 FHL3Q13643 280 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 ATP1A4Q13733 1029 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 STARD3Q14849 445 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 RAB30Q15771 203 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 ST3GAL2Q16842 350 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 FAM153CQ494X1 144 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 TMEM63BQ5T3F8 832 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 DENND2CQ68D51 928 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 ABLIM2Q6H8Q1 611 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 TLDC1Q6P9B6 456 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 ZNF804AQ7Z570 1209 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 ABHD11Q8NFV4 315 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 SUN3Q8TAQ9 357 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 BBC3Q96PG8 261 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-207ENST00000518569 WDR24Q96S15 920 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 AGAP2Q99490 1192 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 NUDT22Q9BRQ3 303 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 THAP7Q9BT49 309 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-207ENST00000518569 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.35□□□□□ -1.71
VPS13B-207ENST00000518569 RXFP3Q9NSD7 469 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 AMFRQ9UKV5 643 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 ADAMTS5Q9UNA0 930 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 DTNAQ9Y4J8 743 aa4.35□□□□□ -1.71
VPS13B-207ENST00000518569 MGST3O14880 152 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 VNN1O95497 513 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 EBLN1P0CF75 366 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 NTSR1P30989 418 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 GPS1Q13098 491 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 CHAF1AQ13111 956 aaPredicted RBP4.34□□□□□ -1.71
VPS13B-207ENST00000518569 GRM1Q13255 1194 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 ACOX1Q15067 660 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 TRIM71Q2Q1W2 868 aaKnown RBP4.34□□□□□ -1.71
VPS13B-207ENST00000518569 TMTC4Q5T4D3 741 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 CEP85Q6P2H3 762 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 CLEC9AQ6UXN8 241 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 SKAP1Q86WV1 359 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 SFTPA1Q8IWL2 248 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 ZNF527Q8NB42 609 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 NGDNQ8NEJ9 315 aaKnown RBP4.34□□□□□ -1.71
VPS13B-207ENST00000518569 MUL1Q969V5 352 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 PRR25Q96S07 402 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 HELLSQ9NRZ9 838 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 CDC23Q9UJX2 597 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 CCNL1Q9UK58 526 aaPredicted RBP4.34□□□□□ -1.71
VPS13B-207ENST00000518569 MAGED2Q9UNF1 606 aaPredicted RBP4.34□□□□□ -1.71
VPS13B-207ENST00000518569 ST3GAL5Q9UNP4 418 aa4.34□□□□□ -1.71
VPS13B-207ENST00000518569 SLC27A6Q9Y2P4 619 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms