RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 MRGPRX1Q96LB2 322 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 C8orf48Q96LL4 319 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 FCRL3Q96P31 734 aaPredicted RBP9.48□□□□□ -0.89
PVT1-207ENST00000518528 GABRG3Q99928 467 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 LLPHQ9BRT6 129 aaKnown RBP9.48□□□□□ -0.89
PVT1-207ENST00000518528 GPR174Q9BXC1 333 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 NACA2Q9H009 215 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 PRORYQ9H606 182 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 IL21RQ9HBE5 538 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 SPHK2Q9NRA0 654 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 WDR35Q9P2L0 1181 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 EXOC7Q9UPT5 735 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 FNDC3AQ9Y2H6 1198 aaKnown RBP9.48□□□□□ -0.89
PVT1-207ENST00000518528 STYXL1Q9Y6J8 313 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 GOLGA4Q13439 2230 aaKnown RBP9.48□□□□□ -0.89
PVT1-207ENST00000518528 MYO18BQ8IUG5 2567 aa9.48□□□□□ -0.89
PVT1-207ENST00000518528 LAMA5O15230 3695 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 KNTC1P50748 2209 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 FAM149AA5PLN7 773 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 F8VP50 259 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 NPC1O15118 1278 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 SYNCRIPO60506 623 aaKnown RBP9.47□□□□□ -0.89
PVT1-207ENST00000518528 RTN3O95197 1032 aaPredicted RBP9.47□□□□□ -0.89
PVT1-207ENST00000518528 LDHAP00338 332 aaKnown RBP9.47□□□□□ -0.89
PVT1-207ENST00000518528 TMEM191BP0C7N4 346 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 JUPP14923 745 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 YWHAQP27348 245 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 AFF3P51826 1226 aaKnown RBP9.47□□□□□ -0.89
PVT1-207ENST00000518528 ZNF132P52740 706 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 USP46P62068 366 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 PSMC1P62191 440 aaKnown RBP9.47□□□□□ -0.89
PVT1-207ENST00000518528 CFHR1Q03591 330 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 GOLGA8FQ08AF8 430 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 GOLGA8DPQ0D2H9 430 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 CAMK2BQ13554 666 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 DHX8Q14562 1220 aaKnown RBP9.47□□□□□ -0.89
PVT1-207ENST00000518528 HECTD3Q5T447 861 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 DBX2Q6ZNG2 339 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 GPR155Q7Z3F1 870 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 OSTM1Q86WC4 334 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 C1orf127Q8N9H9 656 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 RASSF8Q8NHQ8 419 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 OVCA2Q8WZ82 227 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 FBXO32Q969P5 355 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 HVCN1Q96D96 273 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 DUSP9Q99956 384 aaKnown RBP9.47□□□□□ -0.89
PVT1-207ENST00000518528 FAM213AQ9BRX8 229 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 NUP58Q9BVL2 599 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 PCED1AQ9H1Q7 454 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 SNX25Q9H3E2 840 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.47□□□□□ -0.892e-7■■■■■ 61.4
PVT1-207ENST00000518528 TOR4AQ9NXH8 423 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 WSB2Q9NYS7 404 aaPredicted RBP9.47□□□□□ -0.89
PVT1-207ENST00000518528 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.47□□□□□ -0.89
PVT1-207ENST00000518528 AK5Q9Y6K8 562 aa9.47□□□□□ -0.89
PVT1-207ENST00000518528 METTL12A8MUP2 240 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 PLK4O00444 970 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 ATP2C2O75185 946 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 PDGFRBP09619 1106 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 ACADMP11310 421 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 ITPKBP27987 946 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 EIF2S3P41091 472 aaKnown RBP9.46□□□□□ -0.9
PVT1-207ENST00000518528 UBA7P41226 1012 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 NEK4P51957 841 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 SEMG2Q02383 582 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 IFRD2Q12894 506 aaPredicted RBP9.46□□□□□ -0.9
PVT1-207ENST00000518528 SF3A1Q15459 793 aaKnown RBP9.46□□□□□ -0.9
PVT1-207ENST00000518528 IL17AQ16552 155 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 CCDC142Q17RM4 750 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 SOWAHAQ2M3V2 549 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 TMEM119Q4V9L6 283 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 TAF1BQ53T94 588 aaPredicted RBP9.46□□□□□ -0.9
PVT1-207ENST00000518528 DCAF12L1Q5VU92 463 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 LARP1BQ659C4 914 aaKnown RBP9.46□□□□□ -0.9
PVT1-207ENST00000518528 HS2ST1Q7LGA3 356 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 TMEM25Q86YD3 366 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 MARCH9Q86YJ5 346 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 MIB1Q86YT6 1006 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 BRSK2Q8IWQ3 736 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 MYCBPAPQ8TBZ2 947 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 UCMAQ8WVF2 138 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 ERLEC1Q96DZ1 483 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 HPDLQ96IR7 371 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 ANKRD36BP1Q96IX9 119 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 AK8Q96MA6 479 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 MMS19Q96T76 1030 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 ACOX2Q99424 681 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 BBS2Q9BXC9 721 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 ELOVL4Q9GZR5 314 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 ST6GALNAC4Q9H4F1 302 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 ITM2CQ9NQX7 267 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 RBAKQ9NYW8 714 aaPredicted RBP9.46□□□□□ -0.9
PVT1-207ENST00000518528 FTSJ1Q9UET6 329 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 LSM7Q9UK45 103 aaKnown RBP9.46□□□□□ -0.9
PVT1-207ENST00000518528 ATP8B3O60423 1300 aa9.46□□□□□ -0.9
PVT1-207ENST00000518528 LOC400499M0QZD8 3231 aa9.45□□□□□ -0.9
PVT1-207ENST00000518528 A0A1B0GVT2 93 aa9.45□□□□□ -0.9
PVT1-207ENST00000518528 VWA3AA6NCI4 1184 aa9.45□□□□□ -0.9
PVT1-207ENST00000518528 NEDD8-MDP1E9PL57 170 aa9.45□□□□□ -0.9
PVT1-207ENST00000518528 COCHO43405 550 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms