RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 TNNC2P02585 160 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 ZNF883P0CG24 379 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 GARTP22102 1010 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 WARSP23381 471 aaKnown RBP12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 LMO2P25791 158 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 WASP42768 502 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 WNT7BP56706 349 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 GRAMD4Q6IC98 578 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 IL27RAQ6UWB1 636 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 SLCO6A1Q86UG4 719 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 SFR1Q86XK3 245 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 SCUBE3Q8IX30 993 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 CXorf38Q8TB03 319 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 NOC3LQ8WTT2 800 aaKnown RBP12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 SCFD1Q8WVM8 642 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 KBTBD7Q8WVZ9 684 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 OVCA2Q8WZ82 227 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 XPO6Q96QU8 1125 aaKnown RBP12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 UBL7Q96S82 380 aaPredicted RBP12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 MMS19Q96T76 1030 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 CDC6Q99741 560 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 DUSP9Q99956 384 aaKnown RBP12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 ELOVL4Q9GZR5 314 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 SPHK2Q9NRA0 654 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 SEL1LQ9UBV2 794 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 KALRNO60229 2985 aa12.44□□□□□ -0.42
TMEM55A-202ENST00000518359 FLRT2O43155 660 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 PPP1R37O75864 691 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 RTN3O95197 1032 aaPredicted RBP12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 PDGFRBP09619 1106 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 YWHAQP27348 245 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 CD6P30203 668 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 DDIT3P35638 169 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 MATKP42679 507 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 MDH1BQ5I0G3 518 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 HECTD3Q5T447 861 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 L1TD1Q5T7N2 865 aaKnown RBP12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 EGFLAMQ63HQ2 1017 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 KIAA1324Q6UXG2 1013 aaKnown RBP12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 LIMS2Q7Z4I7 341 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 SYCP3Q8IZU3 236 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 ADAM32Q8TC27 787 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 FBXO32Q969P5 355 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 GABRG3Q99928 467 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 NACA2Q9H009 215 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 IKZF4Q9H2S9 585 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 SNX25Q9H3E2 840 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 PDE11AQ9HCR9 933 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 TM7SF3Q9NS93 570 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 DNAJC17Q9NVM6 304 aaKnown RBP12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 SIX4Q9UIU6 781 aa12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 GOLGA4Q13439 2230 aaKnown RBP12.43□□□□□ -0.42
TMEM55A-202ENST00000518359 A0A087WV48 116 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 GFRA2O00451 464 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 COCHO43405 550 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 GCNT3O95395 438 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 GAP43P17677 238 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 MAOBP27338 520 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 LONP1P36776 959 aaKnown RBP12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 ABCG1P45844 678 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 TUBP50607 506 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 ALCAMQ13740 583 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 STARD3Q14849 445 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 SURF1Q15526 300 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 DYMQ7RTS9 669 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 TMEM25Q86YD3 366 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 MIB1Q86YT6 1006 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 BBS7Q8IWZ6 715 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 NUP93Q8N1F7 819 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 ZCCHC9Q8N567 271 aaKnown RBP12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 DNASE2BQ8WZ79 361 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 MRGPRX1Q96LB2 322 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 STRA6Q9BX79 667 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 MIR1-1HGQ9H1L0 117 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 GAREM1Q9H706 876 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 INTS13Q9NVM9 706 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 CACNA2D2Q9NY47 1150 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 PCDHB13Q9Y5F0 798 aa12.42□□□□□ -0.42
TMEM55A-202ENST00000518359 ATP8B3O60423 1300 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 GOLGA8IPA6NC78 632 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 GOLGA8JA6NMD2 632 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 H3BQV1 296 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 TK2O00142 265 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 KIAA0391O15091 583 aaKnown RBP12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 CACNG3O60359 315 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 BMP15O95972 392 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 NCAM1P13591 858 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 GNL1P36915 607 aaPredicted RBP12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 CYP4F3Q08477 520 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 KCNA1Q09470 495 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 SUZ12Q15022 739 aaKnown RBP12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 DUOXA2Q1HG44 320 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 SCARA3Q6AZY7 606 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 METTL3Q86U44 580 aaKnown RBP12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 GPD1LQ8N335 351 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 PDCD7Q8N8D1 485 aaKnown RBP12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 ZSWIM2Q8NEG5 633 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 ENGASEQ8NFI3 743 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 CADM4Q8NFZ8 388 aa12.41□□□□□ -0.42
TMEM55A-202ENST00000518359 OR6B3Q8NGW1 331 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms