RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 PPP2R2AP63151 447 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 MORF4L2Q15014 288 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 TRIM71Q2Q1W2 868 aaKnown RBP27.71■■■□□ 2.03
COL13A1-210ENST00000517713 FAM26DQ5JW98 314 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 SPATA18Q8TC71 538 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.71■■■□□ 2.03
COL13A1-210ENST00000517713 EPS8L3Q8TE67 593 aaKnown RBP27.71■■■□□ 2.03
COL13A1-210ENST00000517713 PCDH18Q9HCL0 1135 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.71■■■□□ 2.03
COL13A1-210ENST00000517713 NINJ2Q9NZG7 142 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 CENPFP49454 3210 aa27.71■■■□□ 2.03
COL13A1-210ENST00000517713 RGS16O15492 202 aaPredicted RBP27.7■■■□□ 2.03
COL13A1-210ENST00000517713 IL4RP24394 825 aa27.7■■■□□ 2.03
COL13A1-210ENST00000517713 GDF10P55107 478 aa27.7■■■□□ 2.03
COL13A1-210ENST00000517713 GUCY1A3Q02108 690 aa27.7■■■□□ 2.03
COL13A1-210ENST00000517713 UPP1Q16831 310 aa27.7■■■□□ 2.03
COL13A1-210ENST00000517713 RNASEH2BQ5TBB1 312 aaKnown RBP27.7■■■□□ 2.03
COL13A1-210ENST00000517713 ADAM2Q99965 735 aa27.7■■■□□ 2.03
COL13A1-210ENST00000517713 CRTAC1Q9NQ79 661 aa27.7■■■□□ 2.03
COL13A1-210ENST00000517713 BEST1O76090 585 aa27.7■■■□□ 2.02
COL13A1-210ENST00000517713 IBSPP21815 317 aaPredicted RBP27.7■■■□□ 2.02
COL13A1-210ENST00000517713 MDH1P40925 334 aaKnown RBP27.7■■■□□ 2.02
COL13A1-210ENST00000517713 ADIGQ0VDE8 80 aa27.7■■■□□ 2.02
COL13A1-210ENST00000517713 ERMARDQ5T6L9 678 aa27.7■■■□□ 2.02
COL13A1-210ENST00000517713 NPNTQ6UXI9 565 aa27.7■■■□□ 2.02
COL13A1-210ENST00000517713 VSIG1Q86XK7 387 aa27.7■■■□□ 2.02
COL13A1-210ENST00000517713 KCTD13Q8WZ19 329 aa27.7■■■□□ 2.02
COL13A1-210ENST00000517713 P3H4Q92791 437 aa27.7■■■□□ 2.02
COL13A1-210ENST00000517713 RBM15Q96T37 977 aaKnown RBP eCLIP27.7■■■□□ 2.02
COL13A1-210ENST00000517713 SYT15Q9BQS2 421 aa27.7■■■□□ 2.02
COL13A1-210ENST00000517713 TIMM13Q9Y5L4 95 aaPredicted RBP27.7■■■□□ 2.02
COL13A1-210ENST00000517713 RBP3P10745 1247 aa27.69■■■□□ 2.02
COL13A1-210ENST00000517713 NOMO1Q15155 1222 aa27.69■■■□□ 2.02
COL13A1-210ENST00000517713 CA9Q16790 459 aa27.69■■■□□ 2.02
COL13A1-210ENST00000517713 ANKRD20A8PQ5CZ79 823 aa27.69■■■□□ 2.02
COL13A1-210ENST00000517713 CLEC20AQ6ZU45 233 aa27.69■■■□□ 2.02
COL13A1-210ENST00000517713 PCGF5Q86SE9 256 aa27.69■■■□□ 2.02
COL13A1-210ENST00000517713 UNC45BQ8IWX7 931 aa27.69■■■□□ 2.02
COL13A1-210ENST00000517713 PGBD4Q96DM1 585 aa27.69■■■□□ 2.02
COL13A1-210ENST00000517713 PAAF1Q9BRP4 392 aa27.69■■■□□ 2.02
COL13A1-210ENST00000517713 ADAM33Q9BZ11 813 aa27.69■■■□□ 2.02
COL13A1-210ENST00000517713 DNAH12Q6ZR08 3092 aa27.68■■■□□ 2.02
COL13A1-210ENST00000517713 TRPA1O75762 1119 aa27.68■■■□□ 2.02
COL13A1-210ENST00000517713 POMCP01189 267 aa27.68■■■□□ 2.02
COL13A1-210ENST00000517713 FAM200BP0CF97 657 aa27.68■■■□□ 2.02
COL13A1-210ENST00000517713 MATKP42679 507 aa27.68■■■□□ 2.02
COL13A1-210ENST00000517713 SLCO1A2P46721 670 aa27.68■■■□□ 2.02
COL13A1-210ENST00000517713 ADCY1Q08828 1119 aa27.68■■■□□ 2.02
COL13A1-210ENST00000517713 RAET1EQ8TD07 263 aa27.68■■■□□ 2.02
COL13A1-210ENST00000517713 CFHR5Q9BXR6 569 aa27.68■■■□□ 2.02
COL13A1-210ENST00000517713 SHOC2Q9UQ13 582 aa27.68■■■□□ 2.02
COL13A1-210ENST00000517713 AGTP01019 485 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 RPL22P35268 128 aaKnown RBP27.67■■■□□ 2.02
COL13A1-210ENST00000517713 MAGEA4P43358 317 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 ATXN1P54253 815 aaKnown RBP27.67■■■□□ 2.02
COL13A1-210ENST00000517713 MRPS5P82675 430 aaKnown RBP27.67■■■□□ 2.02
COL13A1-210ENST00000517713 ROR1Q01973 937 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 C1orf228Q6PIY5 440 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 PLD5Q8N7P1 536 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 NDRG1Q92597 394 aaKnown RBP27.67■■■□□ 2.02
COL13A1-210ENST00000517713 ZNF670Q9BS34 389 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 LRRC4Q9HBW1 653 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 UBN1Q9NPG3 1134 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 KRT82Q9NSB4 513 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 SLC12A6Q9UHW9 1150 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 APOL1O14791 398 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 SKIP12755 728 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 CDR1P51861 262 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 MAP3K7CLP57077 242 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 AUHQ13825 339 aaKnown RBP27.67■■■□□ 2.02
COL13A1-210ENST00000517713 TIGD5Q53EQ6 642 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 DARS2Q6PI48 645 aaKnown RBP27.67■■■□□ 2.02
COL13A1-210ENST00000517713 STRADAQ7RTN6 431 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 DEFB106AQ8N104 65 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 PQLC3Q8N755 202 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 FAM71DQ8N9W8 422 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 FAM149B1Q96BN6 582 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 C9orf72Q96LT7 481 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 STMN4Q9H169 189 aaPredicted RBP27.67■■■□□ 2.02
COL13A1-210ENST00000517713 CDH9Q9ULB4 789 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 SQORQ9Y6N5 450 aa27.67■■■□□ 2.02
COL13A1-210ENST00000517713 ZNF487B1APH4 448 aa27.66■■■□□ 2.02
COL13A1-210ENST00000517713 IVLP07476 585 aa27.66■■■□□ 2.02
COL13A1-210ENST00000517713 TGM2P21980 687 aa27.66■■■□□ 2.02
COL13A1-210ENST00000517713 CTCFP49711 727 aaPredicted RBP27.66■■■□□ 2.02
COL13A1-210ENST00000517713 LONRF1Q17RB8 773 aa27.66■■■□□ 2.02
COL13A1-210ENST00000517713 MFSD5Q6N075 450 aa27.66■■■□□ 2.02
COL13A1-210ENST00000517713 ZC3H18Q86VM9 953 aaKnown RBP27.66■■■□□ 2.02
COL13A1-210ENST00000517713 PCDH19Q8TAB3 1148 aa27.66■■■□□ 2.02
COL13A1-210ENST00000517713 PRCCQ92733 491 aaPredicted RBP27.66■■■□□ 2.02
COL13A1-210ENST00000517713 SAYSD1Q9NPB0 183 aa27.66■■■□□ 2.02
COL13A1-210ENST00000517713 FARP1Q9Y4F1 1045 aaPredicted RBP27.66■■■□□ 2.02
COL13A1-210ENST00000517713 MYBPHLA2RUH7 354 aa27.65■■■□□ 2.02
COL13A1-210ENST00000517713 DAB1O75553 588 aa27.65■■■□□ 2.02
COL13A1-210ENST00000517713 STIP1P31948 543 aaKnown RBP27.65■■■□□ 2.02
COL13A1-210ENST00000517713 L1CAMP32004 1257 aa27.65■■■□□ 2.02
COL13A1-210ENST00000517713 LSP1P33241 339 aa27.65■■■□□ 2.02
COL13A1-210ENST00000517713 IFI35P80217 286 aaPredicted RBP27.65■■■□□ 2.02
COL13A1-210ENST00000517713 DPYSL2Q16555 572 aa27.65■■■□□ 2.02
COL13A1-210ENST00000517713 PPP6R3Q5H9R7 873 aaPredicted RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms