RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 KRTAP10-10P60014 251 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 SEC61A1P61619 476 aaKnown RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 PSMC1P62191 440 aaKnown RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 ROR2Q01974 943 aaKnown RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 SSRP1Q08945 709 aaKnown RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 TRAF1Q13077 416 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 TBX2Q13207 712 aaPredicted RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 GPS2Q13227 327 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 KCNJ12Q14500 433 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 ADRM1Q16186 407 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 CNGA3Q16281 694 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 LY6KQ17RY6 165 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 SMTNL2Q2TAL5 461 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 ICE2Q659A1 982 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF774Q6NX45 483 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 ARHGAP11AQ6P4F7 1023 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 Q6ZTK2 550 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 TRMT1LQ7Z2T5 733 aaKnown RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF584Q8IVC4 421 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 NXPE1Q8N323 547 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 CBARPQ8N350 705 aaPredicted RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 C7orf57Q8NEG2 295 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 TMEM174Q8WUU8 243 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 EME1Q96AY2 570 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 DPCDQ9BVM2 203 aaPredicted RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 ELOVL1Q9BW60 279 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 BCL2L13Q9BXK5 485 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 PACSIN1Q9BY11 444 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 IL25Q9H293 177 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 AAMDCQ9H7C9 122 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 SIRT3Q9NTG7 399 aaPredicted RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 RBM12Q9NTZ6 932 aaKnown RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 OCIAD1Q9NX40 245 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 INPP5FQ9Y2H2 1132 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 RAD54BQ9Y620 910 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 PRSS21Q9Y6M0 314 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 MUC5BQ9HC84 5762 aaPredicted RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF891A8MT65 544 aaPredicted RBP0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 PRAC2D3DTV9 90 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 CES2O00748 559 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 ERC2O15083 957 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 SLC22A3O75751 556 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 PLAUP00749 431 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 MTHFD1P11586 935 aaKnown RBP0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 MYCLP12524 364 aaPredicted RBP0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 LINC01547P58512 204 aaPredicted RBP0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 CTXN1P60606 82 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 PHEXP78562 749 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 TRAF3Q13114 568 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 KCNB1Q14721 858 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 TMEM30BQ3MIR4 351 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 PABPC1LQ4VXU2 614 aaKnown RBP0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 ARHGAP40Q5TG30 622 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 ASPHD1Q5U4P2 390 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 RAPH1Q70E73 1250 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 NT5DC4Q86YG4 428 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 FAM217AQ8IXS0 508 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 C16orf71Q8IYS4 520 aaPredicted RBP0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 CLIP4Q8N3C7 705 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 LINC00612Q8N6U2 182 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 LILRB1Q8NHL6 650 aaPredicted RBP0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 PAWRQ96IZ0 340 aaKnown RBP0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 LITAFQ99732 161 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 BARHL1Q9BZE3 327 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 PLAC1Q9HBJ0 212 aa0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 THG1LQ9NWX6 298 aaKnown RBP0.3□□□□□ -2.36
RNU6-557P-201ENST00000516842 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF785A8K8V0 405 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 NEMP1O14524 444 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 TRAFD1O14545 582 aaPredicted RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 SORBS2O94875 1100 aaKnown RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 CD63P08962 238 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 DLDP09622 509 aaKnown RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 GATA1P15976 413 aaPredicted RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 TACR3P29371 465 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 HOXA7P31268 230 aaPredicted RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF135P52742 658 aaPredicted RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF280AP59817 542 aaPredicted RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 SEMA5AQ13591 1074 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 KPNB1Q14974 876 aaKnown RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF326Q5BKZ1 582 aaKnown RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 DALRD3Q5D0E6 543 aaKnown RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 Q5PR19 223 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 DEPDC1Q5TB30 811 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 RETSATQ6NUM9 610 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 CAND1Q86VP6 1230 aaKnown RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 CIARTQ8N365 385 aaPredicted RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 Q8N7P7 452 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 EFHBQ8N7U6 833 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF610Q8N9Z0 462 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 IL17RDQ8NFM7 739 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 DDX55Q8NHQ9 600 aaKnown RBP eCLIP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 NEK9Q8TD19 979 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF689Q96CS4 500 aaPredicted RBP0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 HS6ST2Q96MM7 605 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 FIZ1Q96SL8 496 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 WNT8AQ9H1J5 351 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 ISCUQ9H1K1 167 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 GREM2Q9H772 168 aa0.29□□□□□ -2.36
RNU6-557P-201ENST00000516842 TXNRD2Q9NNW7 524 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms