RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 CSH1P0DML2 217 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 CSH2P0DML3 217 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 ACADMP11310 421 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 GNLYP22749 145 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 EPHA8P29322 1005 aaPredicted RBP8.2□□□□□ -1.1
CLDND1-229ENST00000513988 ARL2P36404 184 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 ARRB1P49407 418 aaPredicted RBP8.2□□□□□ -1.1
CLDND1-229ENST00000513988 CYP4F2P78329 520 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 DAB2P98082 770 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 SRSF6Q13247 344 aaKnown RBP8.2□□□□□ -1.1
CLDND1-229ENST00000513988 STARD3Q14849 445 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 LAPTM4AQ15012 233 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 SHBQ15464 509 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 FAM187BQ17R55 369 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 EEF1DP3Q658K8 133 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 PPP4R3AQ6IN85 833 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 RHBDF2Q6PJF5 856 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 B3GNT9Q6UX72 402 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 LIAT1Q6ZQX7 453 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 CLEC14AQ86T13 490 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 FAM124AQ86V42 546 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 ZBTB8OSQ8IWT0 167 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 REXO1Q8N1G1 1221 aaKnown RBP8.2□□□□□ -1.1
CLDND1-229ENST00000513988 ZNF713Q8N859 430 aaPredicted RBP8.2□□□□□ -1.1
CLDND1-229ENST00000513988 NAT16Q8N8M0 369 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 C18orf25Q96B23 403 aaPredicted RBP8.2□□□□□ -1.1
CLDND1-229ENST00000513988 SKA1Q96BD8 255 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 DRC1Q96MC2 740 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 C6orf106Q9H6K1 298 aaPredicted RBP8.2□□□□□ -1.1
CLDND1-229ENST00000513988 RPF1Q9H9Y2 349 aaKnown RBP8.2□□□□□ -1.1
CLDND1-229ENST00000513988 C6orf50Q9HD87 102 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 BARHL2Q9NY43 387 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 TJP2Q9UDY2 1190 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 DAXXQ9UER7 740 aaPredicted RBP8.2□□□□□ -1.1
CLDND1-229ENST00000513988 TUBD1Q9UJT1 453 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 ITGB1BP2Q9UKP3 347 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.2□□□□□ -1.1
CLDND1-229ENST00000513988 STARD13Q9Y3M8 1113 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 PCDHGA8Q9Y5G5 932 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 UBE4BO95155 1302 aa8.2□□□□□ -1.1
CLDND1-229ENST00000513988 CCDC69A6NI79 296 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 LEFTY2O00292 366 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 SCAMP3O14828 347 aaKnown RBP8.19□□□□□ -1.1
CLDND1-229ENST00000513988 VILLO15195 856 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 TULP3O75386 442 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 TADA3O75528 432 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 ADH1BP00325 375 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 PRKCGP05129 697 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 P4HBP07237 508 aaKnown RBP8.19□□□□□ -1.1
CLDND1-229ENST00000513988 HAPLN1P10915 354 aaPredicted RBP8.19□□□□□ -1.1
CLDND1-229ENST00000513988 MS4A1P11836 297 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 PRF1P14222 555 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 LIG1P18858 919 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 HDCP19113 662 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 CD27P26842 260 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 SLC19A1P41440 591 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 POLE2P56282 527 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 FUT2Q10981 343 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 ESPL1Q14674 2120 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 FUT11Q495W5 492 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 DCAF6Q58WW2 860 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 DSTYKQ6XUX3 929 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 APBB1IPQ7Z5R6 666 aaPredicted RBP8.19□□□□□ -1.1
CLDND1-229ENST00000513988 HEATR4Q86WZ0 1026 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 FAM114A1Q8IWE2 563 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 SLC34A3Q8N130 599 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 STKLD1Q8NE28 680 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 LRRC15Q8TF66 581 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 SIPA1Q96FS4 1042 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 ZMAT2Q96NC0 199 aaKnown RBP8.19□□□□□ -1.1
CLDND1-229ENST00000513988 CCDC94Q9BW85 323 aaPredicted RBP8.19□□□□□ -1.1
CLDND1-229ENST00000513988 GCNT4Q9P109 453 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 WRAP73Q9P2S5 460 aaPredicted RBP8.19□□□□□ -1.1
CLDND1-229ENST00000513988 USP20Q9Y2K6 914 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 PCSK5Q92824 1860 aa8.19□□□□□ -1.1
CLDND1-229ENST00000513988 NUMA1Q14980 2115 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 A0A1W2PNU3 283 aaPredicted RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 C2orf78A6NCI8 922 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 GFRA2O00451 464 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 HNRNPRO43390 633 aaKnown RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 FSBPO95073 299 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 TNFSF15O95150 251 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 LUC7L3O95232 432 aaKnown RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 IGLV3-19P01714 112 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 C8BP07358 591 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 THEGLP0DJG4 465 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 KCNE1P15382 129 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 GRIK1P39086 918 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 PDE6CP51160 858 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 GAD2Q05329 585 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 TGIF1Q15583 401 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 ISXQ2M1V0 245 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 ZXDCQ2QGD7 858 aaPredicted RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 XKR4Q5GH76 650 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 LY6G5CQ5SRR4 150 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 SFMBT2Q5VUG0 894 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 BORAQ6PGQ7 559 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 CWC27Q6UX04 472 aaKnown RBP8.18□□□□□ -1.1
CLDND1-229ENST00000513988 ALKAL1Q6UXT8 129 aa8.18□□□□□ -1.1
CLDND1-229ENST00000513988 RAB11FIP4Q86YS3 637 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms