RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 SH3BP1Q9Y3L3 701 aa28.19■■■□□ 2.1
SNF8-208ENST00000510195 MYO16Q9Y6X6 1858 aa28.19■■■□□ 2.1
SNF8-208ENST00000510195 KIAA1549LQ6ZVL6 1849 aa28.18■■■□□ 2.1
SNF8-208ENST00000510195 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.18■■■□□ 2.1
SNF8-208ENST00000510195 CILPO75339 1184 aa28.18■■■□□ 2.1
SNF8-208ENST00000510195 ORC1Q13415 861 aa28.18■■■□□ 2.1
SNF8-208ENST00000510195 HSF5Q4G112 596 aaPredicted RBP28.18■■■□□ 2.1
SNF8-208ENST00000510195 PRR23CQ6ZRP0 262 aa28.18■■■□□ 2.1
SNF8-208ENST00000510195 FMR1NBQ8N0W7 255 aaPredicted RBP28.18■■■□□ 2.1
SNF8-208ENST00000510195 GSDMAQ96QA5 445 aa28.18■■■□□ 2.1
SNF8-208ENST00000510195 HHIPQ96QV1 700 aa28.18■■■□□ 2.1
SNF8-208ENST00000510195 SCML2Q9UQR0 700 aa28.18■■■□□ 2.1
SNF8-208ENST00000510195 PCDHA5Q9Y5H7 936 aa28.18■■■□□ 2.1
SNF8-208ENST00000510195 CETN3O15182 167 aa28.17■■■□□ 2.1
SNF8-208ENST00000510195 ADH5P11766 374 aa28.17■■■□□ 2.1
SNF8-208ENST00000510195 GAD2Q05329 585 aa28.17■■■□□ 2.1
SNF8-208ENST00000510195 PREPLQ4J6C6 727 aaPredicted RBP28.17■■■□□ 2.1
SNF8-208ENST00000510195 CLEC20AQ6ZU45 233 aa28.17■■■□□ 2.1
SNF8-208ENST00000510195 NACA2Q9H009 215 aa28.17■■■□□ 2.1
SNF8-208ENST00000510195 PCDHGA5Q9Y5G8 931 aa28.17■■■□□ 2.1
SNF8-208ENST00000510195 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.17■■■□□ 2.1
SNF8-208ENST00000510195 SDK1Q7Z5N4 2213 aa28.16■■■□□ 2.1
SNF8-208ENST00000510195 GOLGA6L4A6NEF3 574 aa28.16■■■□□ 2.1
SNF8-208ENST00000510195 TLR5O60602 858 aa28.16■■■□□ 2.1
SNF8-208ENST00000510195 EPN2O95208 641 aa28.16■■■□□ 2.1
SNF8-208ENST00000510195 APODP05090 189 aa28.16■■■□□ 2.1
SNF8-208ENST00000510195 EPB41P11171 864 aaKnown RBP28.16■■■□□ 2.1
SNF8-208ENST00000510195 NUCB2P80303 420 aa28.16■■■□□ 2.1
SNF8-208ENST00000510195 FBXL13Q8NEE6 735 aa28.16■■■□□ 2.1
SNF8-208ENST00000510195 WHAMMQ8TF30 809 aa28.16■■■□□ 2.1
SNF8-208ENST00000510195 TWNKQ96RR1 684 aa28.16■■■□□ 2.1
SNF8-208ENST00000510195 CYLDQ9NQC7 956 aa28.16■■■□□ 2.1
SNF8-208ENST00000510195 POLR3BQ9NW08 1133 aaPredicted RBP28.16■■■□□ 2.1
SNF8-208ENST00000510195 MMP17Q9ULZ9 603 aa28.16■■■□□ 2.1
SNF8-208ENST00000510195 HHLA1C9JL84 531 aa28.15■■■□□ 2.1
SNF8-208ENST00000510195 ADORA2BP29275 332 aa28.15■■■□□ 2.1
SNF8-208ENST00000510195 GRIA2P42262 883 aa28.15■■■□□ 2.1
SNF8-208ENST00000510195 TNFRSF4P43489 277 aa28.15■■■□□ 2.1
SNF8-208ENST00000510195 C2orf27AQ580R0 203 aa28.15■■■□□ 2.1
SNF8-208ENST00000510195 ZNF658Q5TYW1 1059 aaPredicted RBP28.15■■■□□ 2.1
SNF8-208ENST00000510195 KBTBD6Q86V97 674 aa28.15■■■□□ 2.1
SNF8-208ENST00000510195 C11orf74Q86VG3 221 aa28.15■■■□□ 2.1
SNF8-208ENST00000510195 TSTD1Q8NFU3 115 aa28.15■■■□□ 2.1
SNF8-208ENST00000510195 EML5Q05BV3 1969 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 HOXC11O43248 304 aaPredicted RBP28.14■■■□□ 2.1
SNF8-208ENST00000510195 KAT7O95251 611 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 ATP5C1P36542 298 aaKnown RBP28.14■■■□□ 2.1
SNF8-208ENST00000510195 PSEN1P49768 467 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 MXI1P50539 228 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 PNOCQ13519 176 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 LY6G5CQ5SRR4 150 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 KLHDC10Q6PID8 442 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 HTR3DQ70Z44 454 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 ZNF276Q8N554 614 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 SPATA20Q8TB22 786 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 MMRN2Q9H8L6 949 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 RAB20Q9NX57 234 aa28.14■■■□□ 2.1
SNF8-208ENST00000510195 MYOFQ9NZM1 2061 aa28.14■■■□□ 2.09
SNF8-208ENST00000510195 SLC30A4O14863 429 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 SMC2O95347 1197 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 ZNF806P0C7X5 589 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 CD58P19256 250 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 PRCPP42785 496 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 SLC6A11P48066 632 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 DGKEP52429 567 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 GOLGA8FQ08AF8 430 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 GOLGA8DPQ0D2H9 430 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 PLK5Q496M5 336 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 BTBD8Q5XKL5 378 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 NUDT18Q6ZVK8 323 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 RASSF3Q86WH2 238 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 SMYD4Q8IYR2 804 aaPredicted RBP28.13■■■□□ 2.09
SNF8-208ENST00000510195 ENGASEQ8NFI3 743 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 KCNV2Q8TDN2 545 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 TSG101Q99816 390 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 DUSP16Q9BY84 665 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 ARRDC1-AS1Q9H2J1 176 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.13■■■□□ 2.09
SNF8-208ENST00000510195 ARHGEF4Q9NR80 690 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 SPHK2Q9NRA0 654 aa28.13■■■□□ 2.09
SNF8-208ENST00000510195 HOOK1Q9UJC3 728 aaKnown RBP28.13■■■□□ 2.09
SNF8-208ENST00000510195 MED19A0JLT2 244 aaPredicted RBP28.12■■■□□ 2.09
SNF8-208ENST00000510195 SCAMP3O14828 347 aaKnown RBP28.12■■■□□ 2.09
SNF8-208ENST00000510195 SLC16A3O15427 465 aaKnown RBP28.12■■■□□ 2.09
SNF8-208ENST00000510195 RHOBTB1O94844 696 aa28.12■■■□□ 2.09
SNF8-208ENST00000510195 ACO1P21399 889 aaKnown RBP28.12■■■□□ 2.09
SNF8-208ENST00000510195 KIF11P52732 1056 aa28.12■■■□□ 2.09
SNF8-208ENST00000510195 SEC13P55735 322 aa28.12■■■□□ 2.09
SNF8-208ENST00000510195 FKBP3Q00688 224 aaKnown RBP28.12■■■□□ 2.09
SNF8-208ENST00000510195 ELF2Q15723 593 aa28.12■■■□□ 2.09
SNF8-208ENST00000510195 CRY1Q16526 586 aa28.12■■■□□ 2.09
SNF8-208ENST00000510195 USP39Q53GS9 565 aaKnown RBP28.12■■■□□ 2.09
SNF8-208ENST00000510195 BBS7Q8IWZ6 715 aa28.12■■■□□ 2.09
SNF8-208ENST00000510195 TIGD1Q96MW7 591 aa28.12■■■□□ 2.09
SNF8-208ENST00000510195 KLF16Q9BXK1 252 aaPredicted RBP28.12■■■□□ 2.09
SNF8-208ENST00000510195 NCOR2Q9Y618 2525 aa28.11■■■□□ 2.09
SNF8-208ENST00000510195 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.11■■■□□ 2.09
SNF8-208ENST00000510195 PGFP49763 221 aa28.11■■■□□ 2.09
SNF8-208ENST00000510195 GPRIN1Q7Z2K8 1008 aa28.11■■■□□ 2.09
SNF8-208ENST00000510195 CCDC186Q7Z3E2 898 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms