RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 GRIA2P42262 883 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 ASPAP45381 313 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 SLC6A11P48066 632 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 GCLMP48507 274 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 LIMK1P53667 647 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 MCCD1P59942 119 aaPredicted RBP13.36□□□□□ -0.27
KDM3B-206ENST00000509468 GAB4Q2WGN9 574 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 PLK5Q496M5 336 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 AASDHQ4L235 1098 aaPredicted RBP13.36□□□□□ -0.27
KDM3B-206ENST00000509468 TTC39CQ8N584 583 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 C12orf29Q8N999 325 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 FAXDC2Q96IV6 333 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 CCSER2Q9H7U1 834 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 VPS45Q9NRW7 570 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 POLR3BQ9NW08 1133 aaPredicted RBP13.36□□□□□ -0.27
KDM3B-206ENST00000509468 MMP17Q9ULZ9 603 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 SCML2Q9UQR0 700 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 DNAH14Q0VDD8 3507 aa13.36□□□□□ -0.27
KDM3B-206ENST00000509468 STX10O60499 249 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 TLR5O60602 858 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 BEST1O76090 585 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 ATP5C1P36542 298 aaKnown RBP13.35□□□□□ -0.27
KDM3B-206ENST00000509468 PSEN1P49768 467 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 SEC13P55735 322 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 PPP3CAQ08209 521 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 GOLGA8FQ08AF8 430 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 GOLGA8DPQ0D2H9 430 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 INCA1Q0VD86 236 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 ORC1Q13415 861 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 CRY1Q16526 586 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 EDRF1Q3B7T1 1238 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 EOGTQ5NDL2 527 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 PLA2G2CQ5R387 149 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 LY6G5CQ5SRR4 150 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 IL31Q6EBC2 164 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 SPOPLQ6IQ16 392 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 HTR3DQ70Z44 454 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 CCDC33Q8N5R6 958 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 ZMIZ2Q8NF64 920 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 ZFRQ96KR1 1074 aaKnown RBP13.35□□□□□ -0.27
KDM3B-206ENST00000509468 DUSP15Q9H1R2 295 aaPredicted RBP13.35□□□□□ -0.27
KDM3B-206ENST00000509468 TMEM8AQ9HCN3 771 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 PNPLA8Q9NP80 782 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 ARHGEF4Q9NR80 690 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 FAM49BQ9NUQ9 324 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 RMND1Q9NWS8 449 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 GMIPQ9P107 970 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 CEP250Q9BV73 2442 aa13.35□□□□□ -0.27
KDM3B-206ENST00000509468 TBC1D3BA6NDS4 549 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 GOLGA6L4A6NEF3 574 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 CETN3O15182 167 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 ADORA2BP29275 332 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 PLA2G4AP47712 749 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 BYSLQ13895 437 aaKnown RBP13.34□□□□□ -0.27
KDM3B-206ENST00000509468 SF3A2Q15428 464 aaKnown RBP13.34□□□□□ -0.27
KDM3B-206ENST00000509468 ANO4Q32M45 955 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 KRT39Q6A163 491 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 TADA2BQ86TJ2 420 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 RASSF3Q86WH2 238 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 ZNF276Q8N554 614 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 TAS1R2Q8TE23 839 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 CHAMP1Q96JM3 812 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 CNOT6LQ96LI5 555 aaKnown RBP13.34□□□□□ -0.27
KDM3B-206ENST00000509468 KLF16Q9BXK1 252 aaPredicted RBP13.34□□□□□ -0.27
KDM3B-206ENST00000509468 NIF3L1Q9GZT8 377 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 FAM124BQ9H5Z6 455 aaPredicted RBP13.34□□□□□ -0.27
KDM3B-206ENST00000509468 POLMQ9NP87 494 aaPredicted RBP13.34□□□□□ -0.27
KDM3B-206ENST00000509468 CYLDQ9NQC7 956 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 SPHK2Q9NRA0 654 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 WDR35Q9P2L0 1181 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 DEC1Q9P2X7 70 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 PCDHA5Q9Y5H7 936 aa13.34□□□□□ -0.27
KDM3B-206ENST00000509468 THADAQ6YHU6 1953 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 SCAMP3O14828 347 aaKnown RBP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 DCLK1O15075 740 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 HOXC11O43248 304 aaPredicted RBP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 GDF9O60383 454 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 CILPO75339 1184 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 KLF8O95600 359 aaPredicted RBP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 CAVIN2O95810 425 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 TRIM49P0CI25 452 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 TRIM49CP0CI26 452 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 EPB41P11171 864 aaKnown RBP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 ACO1P21399 889 aaKnown RBP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 GBP1P32455 592 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 TIE1P35590 1138 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 MPLP40238 635 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 ANO7Q6IWH7 933 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 KLHDC10Q6PID8 442 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 CLEC20AQ6ZU45 233 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 TRMT11Q7Z4G4 463 aaKnown RBP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 BBS7Q8IWZ6 715 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 ALLCQ8N6M5 410 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 NAT16Q8N8M0 369 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 IL17RCQ8NAC3 791 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 TXNDC5Q8NBS9 432 aaKnown RBP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 HEXIM2Q96MH2 286 aaKnown RBP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 XPO6Q96QU8 1125 aaKnown RBP13.33□□□□□ -0.28
KDM3B-206ENST00000509468 DUSP16Q9BY84 665 aa13.33□□□□□ -0.28
KDM3B-206ENST00000509468 GTPBP4Q9BZE4 634 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms