RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SGO2Q562F6 1265 aa19.67■□□□□ 0.74
UBE3D-207ENST00000509102 SLC4A11Q8NBS3 891 aa19.67■□□□□ 0.74
UBE3D-207ENST00000509102 RUBCNQ92622 972 aa19.67■□□□□ 0.74
UBE3D-207ENST00000509102 CHFRQ96EP1 664 aa19.67■□□□□ 0.74
UBE3D-207ENST00000509102 CDK5RAP1Q96SZ6 601 aaKnown RBP19.67■□□□□ 0.74
UBE3D-207ENST00000509102 LSM7Q9UK45 103 aaKnown RBP19.67■□□□□ 0.74
UBE3D-207ENST00000509102 SLC8A2Q9UPR5 921 aa19.67■□□□□ 0.74
UBE3D-207ENST00000509102 RIF1Q5UIP0 2472 aaKnown RBP19.67■□□□□ 0.74
UBE3D-207ENST00000509102 MYO15AQ9UKN7 3530 aa19.67■□□□□ 0.74
UBE3D-207ENST00000509102 CYP26A1O43174 497 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 EGFP01133 1207 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 RALAP11233 206 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 CD19P15391 556 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 STX17P56962 302 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 LRMPQ12912 555 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 ARHGAP17Q68EM7 881 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 GPRIN1Q7Z2K8 1008 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 ADGRG2Q8IZP9 1017 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 ARHGAP18Q8N392 663 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 ACDQ96AP0 544 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 NCDNQ9UBB6 729 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 NAGPAQ9UK23 515 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 KIAA1257Q9ULG3 409 aa19.66■□□□□ 0.74
UBE3D-207ENST00000509102 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.66■□□□□ 0.74
UBE3D-207ENST00000509102 PTPRZ1P23471 2315 aaPredicted RBP19.65■□□□□ 0.74
UBE3D-207ENST00000509102 HHLA1C9JL84 531 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 LILRB5O75023 590 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 RNF40O75150 1001 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 CYP17A1P05093 508 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 CNR2P34972 360 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 KIF11P52732 1056 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 DHCR24Q15392 516 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 PREPLQ4J6C6 727 aaPredicted RBP19.65■□□□□ 0.74
UBE3D-207ENST00000509102 BTBD8Q5XKL5 378 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 CCDC186Q7Z3E2 898 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 LONP2Q86WA8 852 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 PPM1KQ8N3J5 372 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 ANKRD52Q8NB46 1076 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 SRRTQ9BXP5 876 aaKnown RBP19.65■□□□□ 0.74
UBE3D-207ENST00000509102 UBXN6Q9BZV1 441 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 EPC1Q9H2F5 836 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 CYLDQ9NQC7 956 aa19.65■□□□□ 0.74
UBE3D-207ENST00000509102 FANCMQ8IYD8 2048 aa19.64■□□□□ 0.74
UBE3D-207ENST00000509102 FAM186AA6NE01 2351 aa19.64■□□□□ 0.74
UBE3D-207ENST00000509102 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.64■□□□□ 0.73
UBE3D-207ENST00000509102 CHURC1-FNTBB4DL54 471 aa19.64■□□□□ 0.73
UBE3D-207ENST00000509102 SCAMP3O14828 347 aaKnown RBP19.64■□□□□ 0.73
UBE3D-207ENST00000509102 AFPP02771 609 aaKnown RBP19.64■□□□□ 0.73
UBE3D-207ENST00000509102 IRF1P10914 325 aa19.64■□□□□ 0.73
UBE3D-207ENST00000509102 ADH5P11766 374 aa19.64■□□□□ 0.73
UBE3D-207ENST00000509102 TDGF1P13385 188 aa19.64■□□□□ 0.73
UBE3D-207ENST00000509102 EIF2DP41214 584 aaKnown RBP19.64■□□□□ 0.73
UBE3D-207ENST00000509102 BCAT1P54687 386 aa19.64■□□□□ 0.73
UBE3D-207ENST00000509102 C10orf120Q5SQS8 335 aa19.64■□□□□ 0.73
UBE3D-207ENST00000509102 KLHDC10Q6PID8 442 aa19.64■□□□□ 0.73
UBE3D-207ENST00000509102 RWDD2AQ9UIY3 292 aa19.64■□□□□ 0.73
UBE3D-207ENST00000509102 DNMT3LQ9UJW3 386 aa19.64■□□□□ 0.73
UBE3D-207ENST00000509102 SMG5Q9UPR3 1016 aaKnown RBP19.64■□□□□ 0.73
UBE3D-207ENST00000509102 A0A1W2PQH9 124 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 VDRP11473 427 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 RARGP13631 454 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 HOXA6P31267 233 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 MARSP56192 900 aaKnown RBP19.63■□□□□ 0.73
UBE3D-207ENST00000509102 GAD2Q05329 585 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 KCNH2Q12809 1159 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 TPD52L1Q16890 204 aaPredicted RBP19.63■□□□□ 0.73
UBE3D-207ENST00000509102 GOLGA7BQ2TAP0 167 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 HEATR6Q6AI08 1181 aaKnown RBP19.63■□□□□ 0.73
UBE3D-207ENST00000509102 TMEM270Q6UE05 265 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 NUDT18Q6ZVK8 323 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 PIGZQ86VD9 579 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 CREBRFQ8IUR6 639 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 TRIM59Q8IWR1 403 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 MLKLQ8NB16 471 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 SUMF1Q8NBK3 374 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 ZFRQ96KR1 1074 aaKnown RBP19.63■□□□□ 0.73
UBE3D-207ENST00000509102 LRRC4Q9HBW1 653 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 FBRSL1Q9HCM7 1045 aaKnown RBP19.63■□□□□ 0.73
UBE3D-207ENST00000509102 CLIC5Q9NZA1 410 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 GMEB2Q9UKD1 530 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 TSPAN16Q9UKR8 245 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 PCDHB4Q9Y5E5 795 aa19.63■□□□□ 0.73
UBE3D-207ENST00000509102 MYO16Q9Y6X6 1858 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 K7ESF4 209 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 XPO1O14980 1071 aaKnown RBP19.62■□□□□ 0.73
UBE3D-207ENST00000509102 APODP05090 189 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 PAEPP09466 180 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 PLA2G4AP47712 749 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 FNTBP49356 437 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 BST2Q10589 180 aaKnown RBP19.62■□□□□ 0.73
UBE3D-207ENST00000509102 STILQ15468 1287 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 PRR23BQ6ZRT6 265 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 RSRC2Q7L4I2 434 aaKnown RBP19.62■□□□□ 0.73
UBE3D-207ENST00000509102 CAMKK1Q8N5S9 505 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 RPLP0P6Q8NHW5 317 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 IPO9Q96P70 1041 aaKnown RBP19.62■□□□□ 0.73
UBE3D-207ENST00000509102 PNKPQ96T60 521 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.62■□□□□ 0.73
UBE3D-207ENST00000509102 USP3Q9Y6I4 520 aa19.62■□□□□ 0.73
UBE3D-207ENST00000509102 TBX18O95935 607 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms