RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 SYCE2Q6PIF2 218 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 CRTC1Q6UUV9 634 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 PTCHD4Q6ZW05 846 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 PRIMA1Q86XR5 153 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 FAM186BQ8IYM0 893 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 ELAC2Q9BQ52 826 aaKnown RBP6.07□□□□□ -1.44
GYPA-205ENST00000508337 COLEC11Q9BWP8 271 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 ARFGAP3Q9NP61 516 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 TRIM36Q9NQ86 728 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 MYO1AQ9UBC5 1043 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 DKK4Q9UBT3 224 aa6.07□□□□□ -1.44
GYPA-205ENST00000508337 A0A1W2PPC4 97 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 RNF8O76064 485 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 A1BGP04217 495 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 COPAP53621 1224 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 EIF4A1P60842 406 aaKnown RBP6.06□□□□□ -1.44
GYPA-205ENST00000508337 CYP4F2P78329 520 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 HTRA4P83105 476 aaPredicted RBP6.06□□□□□ -1.44
GYPA-205ENST00000508337 TXNL4AP83876 142 aaKnown RBP6.06□□□□□ -1.44
GYPA-205ENST00000508337 HOXA4Q00056 320 aaPredicted RBP6.06□□□□□ -1.44
GYPA-205ENST00000508337 TIAL1Q01085 375 aaKnown RBP eCLIP6.06□□□□□ -1.44
GYPA-205ENST00000508337 BTKQ06187 659 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 MRNIPQ6NTE8 343 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 CATSPERGQ6ZRH7 1159 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 KRT28Q7Z3Y7 464 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 TTC30AQ86WT1 665 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 TERB1Q8NA31 727 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 CYP2W1Q8TAV3 490 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 SNX27Q96L92 541 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 MMS19Q96T76 1030 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 EIF3CQ99613 913 aaKnown RBP6.06□□□□□ -1.44
GYPA-205ENST00000508337 KRTAP4-2Q9BYR5 136 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.06□□□□□ -1.44
GYPA-205ENST00000508337 ZBTB26Q9HCK0 441 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 NLRC4Q9NPP4 1024 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 RIMKLBQ9ULI2 386 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 GABRQQ9UN88 632 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 MAN2B2Q9Y2E5 1009 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 COX11Q9Y6N1 276 aa6.06□□□□□ -1.44
GYPA-205ENST00000508337 KAT6AQ92794 2004 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 MANSC4A6NHS7 340 aaPredicted RBP6.05□□□□□ -1.44
GYPA-205ENST00000508337 PODXLO00592 558 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 AREL1O15033 823 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 NCK2O43639 380 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 USP1O94782 785 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 TJP3O95049 919 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 TMEM225BP0DP42 221 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 FPR3P25089 353 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 SLC10A2Q12908 348 aaPredicted RBP6.05□□□□□ -1.44
GYPA-205ENST00000508337 CYP1B1Q16678 543 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 P3H1Q32P28 736 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 MAP9Q49MG5 647 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 MANEALQ5VSG8 457 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 HIBCHQ6NVY1 386 aaPredicted RBP6.05□□□□□ -1.44
GYPA-205ENST00000508337 SFTPA1Q8IWL2 248 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 PNLDC1Q8NA58 520 aaKnown RBP6.05□□□□□ -1.44
GYPA-205ENST00000508337 HASPINQ8TF76 798 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 ABHD5Q8WTS1 349 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 BBC3Q96PG8 261 aaPredicted RBP6.05□□□□□ -1.44
GYPA-205ENST00000508337 CHMP4AQ9BY43 222 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 MGAT4CQ9UBM8 478 aa6.05□□□□□ -1.44
GYPA-205ENST00000508337 RGS17Q9UGC6 210 aaPredicted RBP6.05□□□□□ -1.44
GYPA-205ENST00000508337 MAGED2Q9UNF1 606 aaPredicted RBP6.05□□□□□ -1.44
GYPA-205ENST00000508337 LRRC3CA6NJW4 275 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 MASP2O00187 686 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 ZNF37AP17032 561 aaPredicted RBP6.04□□□□□ -1.44
GYPA-205ENST00000508337 TM4SF4P48230 202 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 COPB1P53618 953 aaKnown RBP6.04□□□□□ -1.44
GYPA-205ENST00000508337 MRPS21P82921 87 aaKnown RBP6.04□□□□□ -1.44
GYPA-205ENST00000508337 SYCP2LQ5T4T6 812 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 PRAMEF17Q5VTA0 474 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 IZUMO3Q5VZ72 239 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 TMEM65Q6PI78 240 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 KIRREL2Q6UWL6 708 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 C16orf71Q8IYS4 520 aaPredicted RBP6.04□□□□□ -1.44
GYPA-205ENST00000508337 MBD3L2Q8NHZ7 208 aaPredicted RBP6.04□□□□□ -1.44
GYPA-205ENST00000508337 FYTTD1Q96QD9 318 aaKnown RBP6.04□□□□□ -1.44
GYPA-205ENST00000508337 USP29Q9HBJ7 922 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 GJB4Q9NTQ9 266 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 ADAM21Q9UKJ8 722 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 SLC27A6Q9Y2P4 619 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 PCDHGB2Q9Y5G2 931 aa6.04□□□□□ -1.44
GYPA-205ENST00000508337 CCDC194A0A1B0GVG4 234 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 FGAP02671 866 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 ADRA1DP25100 572 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 EEF1GP26641 437 aaKnown RBP6.03□□□□□ -1.44
GYPA-205ENST00000508337 ITPKBP27987 946 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 RENBPP51606 427 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 ALDH5A1P51649 535 aaPredicted RBP6.03□□□□□ -1.44
GYPA-205ENST00000508337 OS9Q13438 667 aaPredicted RBP6.03□□□□□ -1.44
GYPA-205ENST00000508337 STARD3Q14849 445 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 CLCA4Q14CN2 919 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 SLC35G1Q2M3R5 365 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.03□□□□□ -1.44
GYPA-205ENST00000508337 CC2D1BQ5T0F9 858 aaKnown RBP6.03□□□□□ -1.44
GYPA-205ENST00000508337 TMEM63BQ5T3F8 832 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 ZNF788Q6ZQV5 615 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 KRT73Q86Y46 540 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 CCDC28AQ8IWP9 274 aa6.03□□□□□ -1.44
GYPA-205ENST00000508337 VGLL2Q8N8G2 317 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms