RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 TMEM131Q92545 1883 aa9.82□□□□□ -0.84
UBE2D3-223ENST00000508249 TP53BP1Q12888 1972 aaPredicted RBP9.82□□□□□ -0.84
UBE2D3-223ENST00000508249 BSNQ9UPA5 3926 aa9.82□□□□□ -0.84
UBE2D3-223ENST00000508249 BICDL2A1A5D9 508 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 SLC16A3O15427 465 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 STX10O60499 249 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 GADD45BO75293 160 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 KRT19P08727 400 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 FTH1P19P0C7X4 201 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 EPB41P11171 864 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 P4HA1P13674 534 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 PLA2G2AP14555 144 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 PCSK1P29120 753 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 GTF2H1P32780 548 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 LHX1P48742 406 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 GPR15P49685 360 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 MCCD1P59942 119 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 ZXDBP98169 803 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 FKBP3Q00688 224 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 MYL7Q01449 175 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 TSPY1Q01534 308 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 ADAM9Q13443 819 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 TRPC3Q13507 836 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 ZNF268Q14587 947 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 CEP135Q66GS9 1140 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 TRAPPC11Q7Z392 1133 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 ITIH5Q86UX2 942 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 LRRTM3Q86VH5 581 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 DCP1BQ8IZD4 617 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 MINDY1Q8N5J2 469 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 PNPLA1Q8N8W4 532 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 RDH13Q8NBN7 331 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 ZSWIM2Q8NEG5 633 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 PARD3BQ8TEW8 1205 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 TAF4BQ92750 862 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 NUSAP1Q9BXS6 441 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 ZCWPW1Q9H0M4 648 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 CCDC86Q9H6F5 360 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 VRTNQ9H8Y1 702 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 KIF9Q9HAQ2 790 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 DNAAF2Q9NVR5 837 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 TOR4AQ9NXH8 423 aa9.81□□□□□ -0.84
UBE2D3-223ENST00000508249 COL5A1P20908 1838 aaPredicted RBP9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 A0A087WV48 116 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 ADAM23O75077 832 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 CBFA2T3O75081 653 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 DKK1O94907 266 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 PRKCSHP14314 528 aaPredicted RBP9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 TRIM21P19474 475 aaKnown RBP9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 HOXD12P35452 270 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 PRCPP42785 496 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 SEC13P55735 322 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 WNT7BP56706 349 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 BFSP1Q12934 665 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 PDGFRLQ15198 375 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 MAPRE1Q15691 268 aaKnown RBP9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 NFE2Q16621 373 aaPredicted RBP9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 C2orf27AQ580R0 203 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 SLCO6A1Q86UG4 719 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 ZC3H3Q8IXZ2 948 aaKnown RBP9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 FAM186BQ8IYM0 893 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 CCDC33Q8N5R6 958 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 OR5B17Q8NGF7 314 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 CXorf38Q8TB03 319 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 SPPL2BQ8TCT7 592 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 GIPC2Q8TF65 315 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 OSCP1Q8WVF1 389 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 CCDC127Q96BQ5 260 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 HPDLQ96IR7 371 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 FAXDC2Q96IV6 333 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 CEP63Q96MT8 703 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 SEPT5Q99719 369 aaPredicted RBP9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 ACBD6Q9BR61 282 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 IMPG2Q9BZV3 1241 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 DNAI2Q9GZS0 605 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 FAM124BQ9H5Z6 455 aaPredicted RBP9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 METTL14Q9HCE5 456 aaKnown RBP9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 SIX4Q9UIU6 781 aa9.8□□□□□ -0.84
UBE2D3-223ENST00000508249 LRRIQ3A6PVS8 624 aaPredicted RBP9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 SGK1O00141 431 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 SH3BP5O60239 455 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 PHACTR2O75167 634 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 TACC1O75410 805 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 FGFR1OPO95684 399 aaKnown RBP9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 GNA14O95837 355 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 SERPINF2P08697 491 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 HAPLN1P10915 354 aaPredicted RBP9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 AVPR1AP37288 418 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 TUFMP49411 452 aaKnown RBP9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 VAMP7P51809 220 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 TNNC1P63316 161 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 BIRC3Q13489 604 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 CAMK2BQ13554 666 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 MORC3Q14149 939 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 MGAT5BQ3V5L5 792 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 ZACNQ401N2 412 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 SLC39A12Q504Y0 691 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 LYSMD4Q5XG99 296 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 LPCAT2Q7L5N7 544 aa9.79□□□□□ -0.84
UBE2D3-223ENST00000508249 LIMS2Q7Z4I7 341 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms