RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 PCDH19Q8TAB3 1148 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 PPP1R13LQ8WUF5 828 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 SSU72Q9NP77 194 aaKnown RBP11.38□□□□□ -0.59
LIN54-207ENST00000508171 KCNH4Q9UQ05 1017 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 GINS2Q9Y248 185 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 A0A1B0GUA9 196 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 ANP32DO95626 131 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 MT-ND3P03897 115 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 RPSAP08865 295 aaKnown RBP11.38□□□□□ -0.59
LIN54-207ENST00000508171 SKIV2L2P42285 1042 aaKnown RBP11.38□□□□□ -0.59
LIN54-207ENST00000508171 TMEM62Q0P6H9 643 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 PPP6R3Q5H9R7 873 aaPredicted RBP11.38□□□□□ -0.59
LIN54-207ENST00000508171 LRRC6Q86X45 466 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
LIN54-207ENST00000508171 GPATCH11Q8N954 259 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 FAM172AQ8WUF8 416 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 CFAP36Q96G28 342 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 L3MBTL3Q96JM7 780 aaPredicted RBP11.38□□□□□ -0.59
LIN54-207ENST00000508171 ZMAT2Q96NC0 199 aaKnown RBP11.38□□□□□ -0.59
LIN54-207ENST00000508171 C16orf70Q9BSU1 422 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 MIS12Q9H081 205 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 MROH8Q9H579 483 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 MANSC1Q9H8J5 431 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 ITGA11Q9UKX5 1188 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 SNX9Q9Y5X1 595 aa11.38□□□□□ -0.59
LIN54-207ENST00000508171 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.37□□□□□ -0.59
LIN54-207ENST00000508171 LPXNO60711 386 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 PYGBP11216 843 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 ATP2A2P16615 1042 aaKnown RBP11.37□□□□□ -0.59
LIN54-207ENST00000508171 ALDH3A1P30838 453 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 ADCYAP1R1P41586 468 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 ATXN1P54253 815 aaKnown RBP11.37□□□□□ -0.59
LIN54-207ENST00000508171 ZNF200P98182 395 aaPredicted RBP11.37□□□□□ -0.59
LIN54-207ENST00000508171 LAMC2Q13753 1193 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 TFDP2Q14188 446 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 TAF1BQ53T94 588 aaPredicted RBP11.37□□□□□ -0.59
LIN54-207ENST00000508171 FAM47CQ5HY64 1035 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 MTHFD1LQ6UB35 978 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 OLFML1Q6UWY5 402 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 SH2D5Q6ZV89 423 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 MTDHQ86UE4 582 aaKnown RBP11.37□□□□□ -0.59
LIN54-207ENST00000508171 TRIM56Q9BRZ2 755 aaKnown RBP11.37□□□□□ -0.59
LIN54-207ENST00000508171 PCDH18Q9HCL0 1135 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 KANSL3Q9P2N6 904 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 ZSWIM8A7E2V4 1837 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 PLXNA1Q9UIW2 1896 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 CXorf49A8MYA2 514 aaPredicted RBP11.37□□□□□ -0.59
LIN54-207ENST00000508171 TM9SF1O15321 606 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 DCTN3O75935 186 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 APRTP07741 180 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 OSBPP22059 807 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 BCAR1P56945 870 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 NLRP9Q7RTR0 991 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 CCDC110Q8TBZ0 833 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 CLEC4CQ8WTT0 213 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 SLC44A1Q8WWI5 657 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 SLC7A6OSQ96CW6 309 aaPredicted RBP11.37□□□□□ -0.59
LIN54-207ENST00000508171 FAM111AQ96PZ2 611 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 SNRNP25Q9BV90 132 aaKnown RBP11.37□□□□□ -0.59
LIN54-207ENST00000508171 PLAC1Q9HBJ0 212 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 TXLNGQ9NUQ3 528 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 C2CD2Q9Y426 696 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 HES2Q9Y543 173 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 IKBKGQ9Y6K9 419 aa11.37□□□□□ -0.59
LIN54-207ENST00000508171 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.36□□□□□ -0.59
LIN54-207ENST00000508171 ASB14A6NK59 587 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 H3BRB1 525 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 SMAPO00193 183 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 CHADO15335 359 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 PAPSS1O43252 624 aaPredicted RBP11.36□□□□□ -0.59
LIN54-207ENST00000508171 C1QAP02745 245 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 INHBAP08476 426 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 YWHAZP63104 245 aaKnown RBP11.36□□□□□ -0.59
LIN54-207ENST00000508171 PPIL2Q13356 520 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 KIZQ2M2Z5 673 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 PKDCCQ504Y2 493 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 BOLA3Q53S33 107 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 GLRA4Q5JXX5 417 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 MARCH8Q5T0T0 291 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 CAND1Q86VP6 1230 aaKnown RBP11.36□□□□□ -0.59
LIN54-207ENST00000508171 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 MAP7D3Q8IWC1 876 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 CTAGE3PQ8IX95 158 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 SLC35F5Q8WV83 523 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 CDCA5Q96FF9 252 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 NCAPGQ9BPX3 1015 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 VPS11Q9H270 941 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 TUT1Q9H6E5 874 aaKnown RBP11.36□□□□□ -0.59
LIN54-207ENST00000508171 EBF2Q9HAK2 575 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 SNTG2Q9NY99 539 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 NR2E3Q9Y5X4 410 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 CEP350Q5VT06 3117 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 IQANK1A0A1B0GTG1 560 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 APOL1O14791 398 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 UGT1A9O60656 530 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 SDC4P31431 198 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 GJA5P36382 358 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 ETV4P43268 484 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 HDAC4P56524 1084 aa11.36□□□□□ -0.59
LIN54-207ENST00000508171 SLC6A3Q01959 620 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms