RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 MFHAS1Q9Y4C4 1052 aa15.13■□□□□ 0.01
DDX41-208ENST00000507955 ZSWIM8A7E2V4 1837 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 MEIS3P2A8K0S8 358 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 ATP5DP30049 168 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 SPRYD7Q5W111 196 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 ZNF467Q7Z7K2 595 aaPredicted RBP15.12■□□□□ 0.01
DDX41-208ENST00000507955 ANKRD23Q86SG2 305 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 PQLC3Q8N755 202 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 MAGEC3Q8TD91 643 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 FBF1Q8TES7 1133 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 SNRNP25Q9BV90 132 aaKnown RBP15.12■□□□□ 0.01
DDX41-208ENST00000507955 TRABDQ9H4I3 376 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 CXorf56Q9H5V9 222 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 RSAD1Q9HA92 442 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 TMPRSS4Q9NRS4 437 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 RABGEF1Q9UJ41 708 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 SMIM28A0A1B0GU29 152 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 DARSP14868 501 aaKnown RBP15.12■□□□□ 0.01
DDX41-208ENST00000507955 CYP2B6P20813 491 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 HDAC4P56524 1084 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 MGAT5Q09328 741 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 ACCSLQ4AC99 568 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 IQSEC1Q6DN90 963 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 TLK2Q86UE8 772 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 PNMA8AQ86V59 439 aaPredicted RBP15.12■□□□□ 0.01
DDX41-208ENST00000507955 AGGF1Q8N302 714 aaeCLIP15.12■□□□□ 0.01
DDX41-208ENST00000507955 PLD5Q8N7P1 536 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 ANKLE1Q8NAG6 615 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 PCDH19Q8TAB3 1148 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.12■□□□□ 0.01
DDX41-208ENST00000507955 KBTBD7Q8WVZ9 684 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 RMDN2Q96LZ7 410 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 RNF157Q96PX1 679 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 SLCO1B3Q9NPD5 702 aa15.12■□□□□ 0.01
DDX41-208ENST00000507955 SYNJ2BP-COX16A0A087WUM0 186 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 IQCA1LA6NCM1 817 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 KCNN4O15554 427 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 MYL3P08590 195 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 ACAT1P24752 427 aaKnown RBP15.11■□□□□ 0.01
DDX41-208ENST00000507955 RBL1P28749 1068 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 PCK1P35558 622 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 SLC6A3Q01959 620 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 ROR1Q01973 937 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 NOTUMQ6P988 496 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 PYROXD2Q8N2H3 581 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 KIF2BQ8N4N8 673 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 FITM2Q8N6M3 262 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 TTC13Q8NBP0 860 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 ZFP42Q96MM3 310 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 COX16Q9P0S2 106 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 TRIM33Q9UPN9 1127 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 EFR3BQ9Y2G0 817 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 A6NJR5 290 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 CLDN5O00501 218 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 ENDOD1O94919 500 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 ABHD2P08910 425 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 HOXD8P13378 290 aaPredicted RBP15.11■□□□□ 0.01
DDX41-208ENST00000507955 SDC4P31431 198 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 AFF1P51825 1210 aaKnown RBP15.11■□□□□ 0.01
DDX41-208ENST00000507955 DNAJC3Q13217 504 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 SLC1A5Q15758 541 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 FAM110CQ1W6H9 321 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 SLC2A14Q8TDB8 520 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 ECT2Q9H8V3 914 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 PCDH18Q9HCL0 1135 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 NKIRAS1Q9NYS0 192 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 HESX1Q9UBX0 185 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 PRKAG3Q9UGI9 489 aa15.11■□□□□ 0.01
DDX41-208ENST00000507955 GNEQ9Y223 722 aaKnown RBP15.11■□□□□ 0.01
DDX41-208ENST00000507955 WDR91A4D1P6 747 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 FAM47DPA6NHR8 397 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 A8MUI8 341 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 F2P00734 622 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 KRT4P19013 534 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 ELK3P41970 407 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 ARL4CP56559 192 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 PITX1P78337 314 aaPredicted RBP15.1■□□□□ 0.01
DDX41-208ENST00000507955 MFSD10Q14728 455 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 SNX17Q15036 470 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 NOMO1Q15155 1222 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 DCAF4L1Q3SXM0 396 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 ALKAL1Q6UXT8 129 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 PALM2Q8IXS6 379 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 BEST2Q8NFU1 509 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 CCDC110Q8TBZ0 833 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 GTF3C2Q8WUA4 911 aaPredicted RBP15.1■□□□□ 0.01
DDX41-208ENST00000507955 SLC4A5Q9BY07 1137 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 USP29Q9HBJ7 922 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 RAB6BQ9NRW1 208 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 NRCAMQ92823 1304 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 TAC1P20366 129 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 TKTP29401 623 aaKnown RBP15.1■□□□□ 0.01
DDX41-208ENST00000507955 GNL1P36915 607 aaPredicted RBP15.1■□□□□ 0.01
DDX41-208ENST00000507955 GBE1Q04446 702 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 FBXO47Q5MNV8 452 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 SPATA21Q7Z572 469 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 TMEM110Q86TL2 294 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 TTC25Q96NG3 672 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 PARK7Q99497 189 aaKnown RBP15.1■□□□□ 0.01
DDX41-208ENST00000507955 ALG13Q9NP73 1137 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms